Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC007390.2-201ENST00000606229 3803 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 ZNF204P-201ENST00000416749 2397 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 Y_RNA.238-201ENST00000364441 102 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNU6-818P-201ENST00000364837 108 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNU6-281P-201ENST00000384212 103 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 MIR10B-201ENST00000385011 110 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNU6-1001P-201ENST00000411265 100 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC245096.1-201ENST00000413104 546 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 EIF1AXP1-201ENST00000419267 435 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 GSTM5P1-201ENST00000434751 660 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RN7SL284P-201ENST00000498823 275 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNA5SP228-201ENST00000516232 133 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AL391261.3-201ENST00000557194 520 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 CYCSP38-201ENST00000559840 322 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC007494.1-201ENST00000562293 760 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC005176.2-201ENST00000596933 147 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC018809.2-201ENST00000602436 3823 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AL162377.2-201ENST00000624532 337 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC241585.2-209ENST00000638217 143 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 AC116667.2-201ENST00000641075 823 ntBASIC5.41□□□□□ -1.54
USB1Q9BQ65 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USB1Q9BQ65 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.41□□□□□ -1.54
USB1Q9BQ65 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC010332.2-201ENST00000613083 1904 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 RNA5SP197-201ENST00000363357 119 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 Y_RNA.412-201ENST00000384001 104 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 SNORA5.1-201ENST00000384275 131 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 SNORA40-201ENST00000388090 126 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 RNU2-2P-201ENST00000410396 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC079780.1-201ENST00000428259 207 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 ANP32BP2-201ENST00000454525 545 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USB1Q9BQ65 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 RPS27AP9-201ENST00000477681 438 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 SCARNA18.1-201ENST00000516330 83 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC093591.2-201ENST00000565254 3843 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC055872.1-201ENST00000570978 278 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC069307.1-201ENST00000602820 447 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 RNU2-4P-201ENST00000606190 192 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.15-201ENST00000611544 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.16-201ENST00000613119 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.12-201ENST00000613778 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.9-201ENST00000615427 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.11-201ENST00000616345 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.2-201ENST00000616535 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 AC068831.7-201ENST00000616954 363 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.3-201ENST00000617785 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.19-201ENST00000618602 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 RNU2-1-201ENST00000618664 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.6-201ENST00000619225 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.5-201ENST00000619465 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 U2.10-201ENST00000620268 191 ntBASIC5.4□□□□□ -1.54
USB1Q9BQ65 SCARNA4-202ENST00000625402 129 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms