| MUC4 | Q99102 | RNU6-444P-201 | ENST00000383988 | 108 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | FGF7P8-201 | ENST00000402994 | 292 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU2-68P-201 | ENST00000410878 | 191 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | ZNF92P1Y-201 | ENST00000415010 | 1191 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC092839.2-201 | ENST00000431130 | 377 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AF274573.2-201 | ENST00000437772 | 520 nt | TSL 5 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | DNAJC19P4-201 | ENST00000440115 | 345 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | VPS26AP1-201 | ENST00000483197 | 979 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RPS27P26-201 | ENST00000494583 | 239 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU4ATAC10P-201 | ENST00000516967 | 122 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC011773.3-201 | ENST00000546501 | 589 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC007115.1-201 | ENST00000546853 | 234 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | ARL2BPP2-201 | ENST00000550907 | 489 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL354943.1-201 | ENST00000572103 | 781 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC011518.1-202 | ENST00000592668 | 407 nt | TSL 5 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AP000254.1-201 | ENST00000609934 | 520 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC018926.3-201 | ENST00000618841 | 406 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SOBP-204 | ENST00000618129 | 1550 nt | TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MTND4P1-201 | ENST00000457501 | 1466 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | C2orf73-208 | ENST00000615983 | 1376 nt | TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SPINT4-201 | ENST00000279058 | 512 nt | APPRIS P1 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | Y_RNA.36-201 | ENST00000362602 | 112 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-152P-201 | ENST00000384037 | 107 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SNORD51-201 | ENST00000384320 | 80 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC005062.1-207 | ENST00000418442 | 587 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | LINC01797-202 | ENST00000433432 | 765 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC024082.2-201 | ENST00000434771 | 238 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC010723.1-201 | ENST00000435111 | 540 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | LINC01162-201 | ENST00000447262 | 447 nt | TSL 5 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC104164.3-201 | ENST00000467363 | 1258 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC140059.1-201 | ENST00000489238 | 361 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-889P-201 | ENST00000517189 | 103 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | HMGB1P1-201 | ENST00000522557 | 636 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SUB1P1-201 | ENST00000524415 | 382 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | LINC02410-201 | ENST00000553095 | 393 nt | TSL 2 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC074051.3-201 | ENST00000570238 | 358 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC103710.1-201 | ENST00000610003 | 901 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | C8orf59-209 | ENST00000612977 | 586 nt | APPRIS P1 TSL 2 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RMST_2.1-201 | ENST00000617263 | 136 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC017104.5-201 | ENST00000637647 | 639 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | ATXN3L-201 | ENST00000380622 | 2164 nt | APPRIS P1 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MTCO1P6-201 | ENST00000481192 | 1384 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | XRCC4-205 | ENST00000511817 | 1636 nt | APPRIS P4 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | Y_RNA.205-201 | ENST00000364128 | 113 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SNORD82-201 | ENST00000365530 | 70 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-339P-201 | ENST00000384310 | 107 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | SNORA51.12-201 | ENST00000384448 | 134 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MOB4-205 | ENST00000409916 | 829 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU2-17P-201 | ENST00000410290 | 190 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-272P-201 | ENST00000411028 | 104 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MTND1P23-201 | ENST00000416931 | 372 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL035410.1-201 | ENST00000427409 | 427 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC079780.1-201 | ENST00000428259 | 207 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | BLOC1S2P1-201 | ENST00000428431 | 301 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | PGBD4P3-201 | ENST00000440731 | 581 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL591848.2-201 | ENST00000442712 | 522 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL359385.1-201 | ENST00000456509 | 365 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC008696.2-201 | ENST00000503323 | 825 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC026780.1-201 | ENST00000512237 | 952 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-1282P-201 | ENST00000516735 | 96 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | LINC02301-203 | ENST00000555798 | 789 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC007495.2-202 | ENST00000564102 | 535 nt | TSL 4 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC126118.1-201 | ENST00000607744 | 628 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC004852.3-201 | ENST00000614131 | 326 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MTND5P29-201 | ENST00000458676 | 1807 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | CNIH4-201 | ENST00000366856 | 808 nt | APPRIS ALT1 TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-891P-201 | ENST00000384280 | 111 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MEIG1-202 | ENST00000407572 | 625 nt | APPRIS P1 TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC010385.1-201 | ENST00000412374 | 256 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MORF4L1P7-201 | ENST00000426038 | 703 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | TH2LCRR-202 | ENST00000435042 | 472 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL590399.3-201 | ENST00000438072 | 543 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | MYCBP2-AS1-202 | ENST00000448470 | 333 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC020900.1-201 | ENST00000502568 | 565 nt | TSL 4 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | LINC02428-201 | ENST00000508099 | 527 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AC117532.1-201 | ENST00000514638 | 323 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | RNU6-1095P-201 | ENST00000516148 | 108 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | OR5AK1P-201 | ENST00000524837 | 922 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | CYCSP26-201 | ENST00000534107 | 320 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | CR383656.7-201 | ENST00000548164 | 174 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC4 | Q99102 | AL049775.2-201 | ENST00000557547 | 558 nt | TSL 4 BASIC | 1.47 | □□□□□ -2.17 | | |