Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC027124.2-201ENST00000428249 105 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC093155.1-201ENST00000440164 826 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AL831737.1-201ENST00000441288 271 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AL592447.1-201ENST00000447592 540 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 RPL21P134-201ENST00000453468 483 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 MTCO3P11-201ENST00000455103 774 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 BZW1P2-201ENST00000473537 826 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC107032.1-201ENST00000485945 480 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC006390.1-201ENST00000508068 283 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC112518.2-201ENST00000508565 425 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC118273.2-201ENST00000532092 465 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 SETP7-201ENST00000552169 453 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 MIR4529-201ENST00000578110 78 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 MIR3200-201ENST00000580767 85 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 DNAJC19P3-201ENST00000594491 331 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC078899.2-201ENST00000595282 212 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 CR589904.2-201ENST00000612533 440 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AL392048.1-201ENST00000613946 534 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AL158801.5-201ENST00000623123 465 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 LINC00216-201ENST00000623548 1126 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AP003400.6-201ENST00000624698 740 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 AC025048.6-202ENST00000627667 438 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.43□□□□□ -2.18
AP1S3Q96PC3 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.43□□□□□ -2.18
AP1S3Q96PC3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC006020.1-201ENST00000420179 1854 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 MIR208A-201ENST00000362287 71 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 RNU6-1339P-201ENST00000363574 91 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 RNU4-53P-201ENST00000410828 140 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 PNRC2P1-201ENST00000423940 420 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL356867.1-201ENST00000429623 299 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 RPL26P6-201ENST00000440913 438 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL121769.1-201ENST00000469473 401 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC020699.1-201ENST00000505161 445 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC006499.2-201ENST00000513470 337 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 LSM6P2-201ENST00000552208 177 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL133241.1-201ENST00000556832 487 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC009063.1-201ENST00000563342 702 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC009097.3-201ENST00000563557 1018 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC027104.1-201ENST00000563702 681 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 MIR3199-1-201ENST00000582434 88 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC005034.5-201ENST00000604219 466 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC106052.1-201ENST00000608029 497 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC005296.1-201ENST00000616145 209 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AL356585.4-201ENST00000623078 1229 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC244517.12-201ENST00000623581 663 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 AC116618.1-201ENST00000634617 774 ntBASIC1.42□□□□□ -2.18
AP1S3Q96PC3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.42□□□□□ -2.18
AP1S3Q96PC3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC008555.8-201ENST00000623602 2168 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 RNA5SP289-201ENST00000362332 137 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 RNA5SP276-201ENST00000362580 94 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL139156.1-201ENST00000412785 841 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC233981.1-201ENST00000423224 461 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL356320.1-201ENST00000429616 163 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 CDC42P1-201ENST00000456658 548 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 ATG12P2-201ENST00000456830 416 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC114781.4-201ENST00000513707 639 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms