Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC099654.12-201ENST00000639868 649 ntBASIC3.89□□□□□ -1.79
CCDC138Q96M89 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC138Q96M89 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC138Q96M89 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC138Q96M89 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC138Q96M89 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC138Q96M89 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC138Q96M89 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL049641.1-201ENST00000441055 1948 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 Y_RNA.3-201ENST00000362331 103 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 RNU6-74P-201ENST00000384235 107 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 RNU6-14P-201ENST00000384630 106 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 RNU6-817P-201ENST00000391083 104 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC138Q96M89 BTF3L4P3-201ENST00000418879 476 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC002486.1-201ENST00000435098 391 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 HMGB1P37-201ENST00000439613 609 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 PIGFP3-201ENST00000441918 722 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC114755.5-201ENST00000447760 831 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC084357.1-201ENST00000473404 255 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL049830.2-201ENST00000480072 201 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC079382.1-201ENST00000493346 557 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC138Q96M89 MIR5047-201ENST00000579212 100 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL121992.2-201ENST00000606262 256 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL591424.2-201ENST00000617023 128 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 ZYXP1-201ENST00000617638 118 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AL158209.2-201ENST00000619266 216 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 AC068724.3-201ENST00000625906 87 ntBASIC3.88□□□□□ -1.79
CCDC138Q96M89 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC138Q96M89 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 SPRR2C-201ENST00000290702 219 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 RN7SKP227-201ENST00000364445 330 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 RNA5SP283-201ENST00000365604 119 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 MIR325-201ENST00000385260 98 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 RNU4-55P-201ENST00000410731 137 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 ATP5HP2-201ENST00000433885 485 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL512844.2-201ENST00000433990 593 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 MTATP6P16-201ENST00000434543 526 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 KCTD9P3-201ENST00000434597 1169 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 Z82210.1-201ENST00000440037 231 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 PRDX3P3-201ENST00000447765 522 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL590664.1-201ENST00000448065 339 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 KC877373.1-201ENST00000479066 408 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AL132838.2-201ENST00000492041 314 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC116562.3-201ENST00000506136 177 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 RN7SKP21-201ENST00000516503 220 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 RNU6-677P-201ENST00000516914 101 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 RANP9-201ENST00000519957 271 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC068587.5-201ENST00000528506 175 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 AC124864.2-201ENST00000624736 186 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 U6.98-201ENST00000637157 84 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 OR5H6-203ENST00000642105 978 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 FAM35BP-202ENST00000497389 3337 ntBASIC3.87□□□□□ -1.79
CCDC138Q96M89 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC138Q96M89 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC138Q96M89 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC138Q96M89 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC138Q96M89 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC138Q96M89 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC138Q96M89 Y_RNA.1-201ENST00000352915 104 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 RNU6-1120P-201ENST00000362988 108 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 RNU6-1167P-201ENST00000363227 94 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 RNA5SP399-201ENST00000364003 117 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 U1.1-201ENST00000384101 164 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 MIR1-2-201ENST00000384961 85 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 AL590704.1-201ENST00000402856 794 ntBASIC3.86□□□□□ -1.79
CCDC138Q96M89 RNU4-6P-201ENST00000410804 122 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms