Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.7□□□□□ -1.66
SHDQ96IW2 UBE2L2-201ENST00000254302 429 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHDQ96IW2 MTCYBP4-201ENST00000401524 249 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
SHDQ96IW2 RPL27AP8-201ENST00000424277 446 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 MTND5P5-201ENST00000503764 376 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 SCARNA15.2-201ENST00000516409 127 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 Y_RNA.718-201ENST00000517110 102 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 COPS8P3-201ENST00000526024 482 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AP003072.1-201ENST00000531740 145 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.7□□□□□ -1.66
SHDQ96IW2 MED28P6-201ENST00000558776 231 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 AC093249.1-201ENST00000567049 203 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 MIR5692C1-201ENST00000585309 91 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.7□□□□□ -1.66
SHDQ96IW2 AC084781.2-201ENST00000615568 161 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.7□□□□□ -1.66
SHDQ96IW2 RNA5SP196-201ENST00000625967 102 ntBASIC4.7□□□□□ -1.66
SHDQ96IW2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SHDQ96IW2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHDQ96IW2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.7□□□□□ -1.66
SHDQ96IW2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHDQ96IW2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHDQ96IW2 MTND4P27-201ENST00000450813 1354 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 MIR301A-201ENST00000385261 86 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 RNY4P36-201ENST00000391116 96 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 TMSB10P2-201ENST00000416049 131 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.69□□□□□ -1.66
SHDQ96IW2 BTF3L4P3-201ENST00000418879 476 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.69□□□□□ -1.66
SHDQ96IW2 AL451062.2-201ENST00000427515 271 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AL590383.1-201ENST00000428602 75 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 FABP5P14-201ENST00000437273 393 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 TXNP1-201ENST00000441872 371 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 CYCSP24-201ENST00000445119 316 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AC034236.1-201ENST00000469891 373 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 AC008526.1-201ENST00000509149 338 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 APOOP4-201ENST00000513530 597 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 RN7SKP13-201ENST00000515933 244 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 Vault.1-201ENST00000516474 102 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 RNU6-323P-201ENST00000521915 107 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AP005639.2-201ENST00000527592 928 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 IMMP1LP2-201ENST00000552954 492 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
SHDQ96IW2 MIR4429-201ENST00000580105 73 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 RN7SL176P-201ENST00000580352 264 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 MIR5690-201ENST00000583739 73 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.69□□□□□ -1.66
SHDQ96IW2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHDQ96IW2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 AC112200.1-201ENST00000625015 234 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 SMG1P4-204ENST00000523028 4131 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 AC009643.2-201ENST00000603543 1448 ntBASIC4.69□□□□□ -1.66
SHDQ96IW2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.69□□□□□ -1.66
SHDQ96IW2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SHDQ96IW2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHDQ96IW2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.69□□□□□ -1.66
SHDQ96IW2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SHDQ96IW2 RNU6-562P-201ENST00000362731 107 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHDQ96IW2 Y_RNA.394-201ENST00000383942 103 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 Y_RNA.482-201ENST00000384377 111 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 RNU6-692P-201ENST00000384496 107 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 Y_RNA.579-201ENST00000390939 94 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 RNU6-370P-201ENST00000411008 104 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 VDAC1P9-201ENST00000412766 841 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 TOMM22P1-201ENST00000418578 312 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.68□□□□□ -1.66
SHDQ96IW2 BRK1P2-201ENST00000442875 223 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 MTND1P17-201ENST00000448961 204 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 AC073073.1-201ENST00000493920 463 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 AC069113.1-201ENST00000517763 267 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 AC087854.1-201ENST00000519706 414 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.68□□□□□ -1.66
SHDQ96IW2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.68□□□□□ -1.66
SHDQ96IW2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHDQ96IW2 MIR548AC-201ENST00000585049 88 ntBASIC4.68□□□□□ -1.66
SHDQ96IW2 AC012119.1-201ENST00000603184 222 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms