Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.450-201ENST00000384198 113 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.510-201ENST00000384511 114 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 EIF4EP1-201ENST00000422311 642 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 MTCO1P39-201ENST00000426148 480 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 ATP5JP1-201ENST00000431631 322 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 RPS24P6-201ENST00000452670 400 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SNORD97-201ENST00000459187 142 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 RPS27AP1-201ENST00000475545 471 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC078918.1-201ENST00000498515 228 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 ARL4AP2-201ENST00000507378 601 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC004062.1-201ENST00000509926 645 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SNORA70.18-201ENST00000516696 98 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 RANP9-201ENST00000519957 271 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 OR5AQ1P-201ENST00000527596 927 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AL512310.1-201ENST00000548639 172 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AL359212.1-201ENST00000556608 614 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AL133241.1-201ENST00000556832 487 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SNORA59B-202ENST00000578183 701 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 MIR4293-201ENST00000584305 78 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 MIR7112-201ENST00000616126 65 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AC138649.5-201ENST00000637456 137 ntBASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 AP001350.1-201ENST00000601906 1524 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 RNU6-1120P-201ENST00000362988 108 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.402-201ENST00000383972 102 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 RNU6-76P-201ENST00000384060 104 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 RNU6-39P-201ENST00000384344 107 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 MIR558-201ENST00000384920 94 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 TXNP7-201ENST00000406296 293 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC245054.1-201ENST00000420944 258 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 ELOCP14-201ENST00000428070 331 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AL596276.1-201ENST00000434465 418 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC024082.2-201ENST00000434771 238 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC005019.1-201ENST00000436455 431 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 ELOCP7-201ENST00000439968 331 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 SNRPGP6-201ENST00000451124 220 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 HMGB1P22-201ENST00000505315 124 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 RNU6-390P-201ENST00000516259 103 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 HMGB1P41-201ENST00000520234 440 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC100770.1-201ENST00000532310 322 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 CBX3P5-201ENST00000552017 521 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 RPL21P7-201ENST00000557463 483 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC012443.1-201ENST00000605605 231 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC008536.2-201ENST00000607284 349 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AL360181.4-201ENST00000621752 134 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC092326.2-201ENST00000624772 1561 ntBASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM43Q96BQ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms