Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC108059.3-201ENST00000456388 214 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 HMGN1P11-201ENST00000508668 303 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC004062.1-201ENST00000509926 645 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC026801.2-201ENST00000515352 425 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-430P-201ENST00000517078 107 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 HMGN1P28-201ENST00000521340 364 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC107934.1-201ENST00000522215 217 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AP003033.1-201ENST00000527244 415 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AP003392.2-201ENST00000527269 208 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AP000857.1-201ENST00000532151 543 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC022880.1-201ENST00000534017 973 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC005476.1-201ENST00000554427 397 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL391156.1-201ENST00000554965 554 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC009063.1-201ENST00000563342 702 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 MIR3913-1-201ENST00000577744 102 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC024220.1-201ENST00000603675 484 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC007038.2-201ENST00000608095 740 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC090970.3-201ENST00000612566 866 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC005332.10-201ENST00000612725 619 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC072046.2-201ENST00000618366 268 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-223P-201ENST00000362830 107 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 MIR449B-201ENST00000384995 97 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-192P-201ENST00000391253 100 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RNU4-65P-201ENST00000410473 140 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 SSXP9-201ENST00000417503 292 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 SYF2P2-201ENST00000417620 583 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 DNAJC19P4-201ENST00000440115 345 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL662791.1-201ENST00000441992 928 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 KCTD9P5-201ENST00000504141 1170 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 RPL37P25-201ENST00000507308 276 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC091133.4-201ENST00000511142 308 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL133271.1-201ENST00000538229 291 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC010546.1-201ENST00000569391 485 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC080078.2-201ENST00000603766 501 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL161729.4-201ENST00000604650 476 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AC008498.1-201ENST00000613012 531 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 AL603758.1-201ENST00000618654 241 ntBASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A1Q8WWI5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 MAPK10-362ENST00000641864 4484 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 MIR148B-201ENST00000362252 99 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 RNY4P34-201ENST00000364779 95 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 RNU5A-6P-201ENST00000384136 116 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 RPS3AP24-201ENST00000407896 734 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms