Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC009812.2-201ENST00000517657 457 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AP000907.2-201ENST00000530827 353 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL133271.1-201ENST00000538229 291 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 RPL21P5-201ENST00000554662 472 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 OR4T1P-201ENST00000554933 911 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL356432.3-201ENST00000568952 465 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 SNORD84-203ENST00000584275 78 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC011451.2-201ENST00000604303 598 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL033523.1-201ENST00000605153 153 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL139286.2-201ENST00000606838 396 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL158211.4-201ENST00000606988 584 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 HULC.1-201ENST00000612720 240 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC009159.1-201ENST00000618386 642 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL590240.3-201ENST00000621416 943 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL159972.1-201ENST00000625150 448 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 MIR622-201ENST00000638396 96 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 EXOC5P1-201ENST00000510543 1969 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNU6-623P-201ENST00000363143 105 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SNORA5B-201ENST00000363786 132 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNU6-1078P-201ENST00000364522 103 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SNORA71.1-201ENST00000364523 117 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNU6-1074P-201ENST00000383995 104 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MIR19A-201ENST00000384878 82 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SNORD115.1-201ENST00000391109 76 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RPS3AP36-201ENST00000398190 775 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RPS3AP24-201ENST00000407896 734 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNA5SP229-201ENST00000410809 99 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNU6-195P-201ENST00000411352 109 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RPS3AP3-201ENST00000411933 242 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 USP9YP36-201ENST00000424581 829 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RPS24P1-201ENST00000438550 371 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MTND6P13-201ENST00000443510 523 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RPL17P49-201ENST00000443728 411 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 CFTRP1-201ENST00000456646 183 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 CEACAMP4-201ENST00000457676 421 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 snoU13.4-201ENST00000458916 104 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 KLF3P2-201ENST00000465138 268 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SNRPGP3-201ENST00000469405 227 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 NDUFB4P2-201ENST00000509515 391 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AP003467.2-201ENST00000520175 319 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC107934.1-201ENST00000522215 217 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC022880.1-201ENST00000534017 973 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC125611.2-201ENST00000551907 647 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MIR3913-1-201ENST00000577744 102 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MIR4528-201ENST00000577763 90 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC087683.1-201ENST00000591187 441 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AC006254.3-201ENST00000603353 884 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 TUG1_1.1-201ENST00000610654 145 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 uc_338.25-201ENST00000613756 156 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 AL360181.4-201ENST00000621752 134 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.48□□□□□ -2.01
LINC01006Q8NI28 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01006Q8NI28 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms