Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC107294.1-201ENST00000609524 467 ntBASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 AL161423.1-201ENST00000613700 262 ntBASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 AP000346.3-201ENST00000622821 210 ntBASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 MAPK10-263ENST00000641052 4307 ntBASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 AP000542.2-201ENST00000623199 6179 ntBASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.44□□□□□ -1.7
ARHGEF39Q8N4T4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 PCAT14-202ENST00000627127 3935 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNA5SP52-201ENST00000362448 134 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 SNORD113.2-201ENST00000364166 89 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-512P-201ENST00000364438 103 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-335P-201ENST00000364563 113 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-1105P-201ENST00000384774 107 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MIR578-201ENST00000384828 96 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MIR301A-201ENST00000385261 86 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RN7SKP267-201ENST00000410381 285 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MCFD2P1-201ENST00000417812 300 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MTCYBP10-201ENST00000424905 650 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AL592045.1-201ENST00000429867 352 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AL160004.2-201ENST00000432935 350 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNA5SP103-201ENST00000459503 118 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RPL5P30-201ENST00000465511 891 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AC010285.1-201ENST00000470580 392 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AC007016.1-201ENST00000512110 244 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 Z99571.1-201ENST00000636677 394 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 MTND5P30-201ENST00000452896 1731 ntBASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ARHGEF39Q8N4T4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 OR4G2P-202ENST00000641004 1759 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 Y_RNA.2-201ENST00000362330 96 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-1309P-201ENST00000363305 108 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 Y_RNA.133-201ENST00000363428 110 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 Y_RNA.158-201ENST00000363651 101 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 U3.15-201ENST00000365398 212 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 SNORA56-201ENST00000383966 129 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-1032P-201ENST00000384100 107 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 MIR514A1-201ENST00000385133 98 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 MRPL42P3-201ENST00000401492 326 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RPS16P5-201ENST00000406501 404 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AC097713.2-201ENST00000430199 356 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 USP9YP30-201ENST00000430729 455 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RPL23AP50-201ENST00000434149 455 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 HSPD1P21-201ENST00000436541 245 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL360271.2-201ENST00000447710 161 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 BTF3P15-201ENST00000455606 336 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL591473.1-201ENST00000464297 313 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AL135752.1-201ENST00000479477 471 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-470P-201ENST00000515954 104 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 RNU6-307P-201ENST00000516743 106 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 AC010653.1-201ENST00000571108 881 ntBASIC4.42□□□□□ -1.7
ARHGEF39Q8N4T4 MIR4330-201ENST00000579077 105 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms