Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AL136131.3-201ENST00000607600 188 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC010632.3-201ENST00000611377 369 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC104260.2-201ENST00000623551 3497 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.105-201ENST00000363182 111 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-1181P-201ENST00000384191 106 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.458-201ENST00000384240 102 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-166P-201ENST00000384371 107 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 MIR124-3-201ENST00000384866 87 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AL035660.1-201ENST00000422041 222 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 SDAD1P3-201ENST00000427380 333 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RN7SL72P-201ENST00000460697 269 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RPS23P5-201ENST00000495419 428 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-138P-201ENST00000515952 107 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 AC027309.3-201ENST00000623419 351 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 Z95331.1-201ENST00000623075 23112 ntBASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DEPDC4Q8N2C3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AC112198.2-201ENST00000426589 6996 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.84-201ENST00000363011 104 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 SNORA12.2-201ENST00000391040 156 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RNU2-71P-201ENST00000411395 189 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 MTND3P9-201ENST00000429526 346 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AL078601.1-201ENST00000444542 271 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RPL23AP24-201ENST00000458203 385 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RPS23P2-201ENST00000463671 415 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 HMGB1P35-201ENST00000503360 598 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-377P-201ENST00000515965 102 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-182P-201ENST00000516970 105 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AC006557.5-201ENST00000603126 811 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 FAM27E4-201ENST00000605259 342 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 AP001282.2-201ENST00000616149 309 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 U4.7-201ENST00000638126 106 ntBASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.22□□□□□ -1.57
DEPDC4Q8N2C3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.21□□□□□ -1.57
DEPDC4Q8N2C3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
DEPDC4Q8N2C3 AP001273.1-201ENST00000624493 3152 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 MIR323A-201ENST00000362199 86 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC016739.1-201ENST00000405359 345 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 RPS3AP2-201ENST00000407190 754 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 OR2AT2P-201ENST00000413438 905 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P38-201ENST00000418090 167 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms