Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF519P1-201ENST00000449011 1626 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC090971.4-201ENST00000560291 1800 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.145-201ENST00000363527 102 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-288P-201ENST00000363690 104 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-715P-201ENST00000365204 103 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-393P-201ENST00000384475 107 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-601P-201ENST00000384540 107 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 SNORA68.2-201ENST00000391263 128 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RPS26P2-201ENST00000440331 348 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RPL29P29-201ENST00000448725 423 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 MIR2053-201ENST00000459295 91 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC011276.1-201ENST00000469688 323 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 NIP7P2-201ENST00000485801 544 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC008526.1-201ENST00000509149 338 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 MTCYBP40-201ENST00000509390 1135 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 SNRPGP18-201ENST00000553000 214 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC015912.2-201ENST00000571053 181 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 MIR5692C1-201ENST00000585309 91 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 U2.17-201ENST00000611454 95 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL445363.3-201ENST00000623080 671 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRIM48Q8IWZ4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-639P-201ENST00000384074 107 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.482-201ENST00000384377 111 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MIR195-201ENST00000385194 87 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 RPS4XP7-201ENST00000406274 780 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 RNU2-43P-201ENST00000410306 190 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 TDGF1P1-201ENST00000445734 527 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 RPS23P7-201ENST00000466210 444 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 RN7SL810P-201ENST00000493031 276 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AP000827.1-201ENST00000527814 258 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC090115.3-201ENST00000553218 849 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MIR4458-201ENST00000578872 75 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MIR3671-201ENST00000580455 88 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 HMGB2P1-201ENST00000591146 634 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MTND5P42-201ENST00000637720 498 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MTND5P19-201ENST00000424872 1794 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 MTND4P1-201ENST00000457501 1466 ntBASIC4.37□□□□□ -1.71
TRIM48Q8IWZ4 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC116667.1-201ENST00000604855 2072 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms