Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC068538.1-201ENST00000376856 336 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC119751.6-201ENST00000416712 186 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AF186996.5-201ENST00000418098 904 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 MTATP6P4-201ENST00000427725 675 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AL592045.1-201ENST00000429867 352 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 RPL26P6-201ENST00000440913 438 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 HMGN2P13-201ENST00000476476 274 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 APOOP4-201ENST00000513530 597 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 RNU6-1212P-201ENST00000517023 104 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 RNU6-897P-201ENST00000517135 105 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC134698.5-201ENST00000519444 336 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC136624.4-201ENST00000573044 370 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC022884.2-201ENST00000578535 580 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 CPDP1-201ENST00000579660 283 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC123912.5-201ENST00000605470 343 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC073869.8-201ENST00000641806 335 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 AC112198.2-201ENST00000426589 6996 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 ASNSP1-201ENST00000518311 1939 ntBASIC5.58□□□□□ -1.52
RNF135Q8IUD6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF135Q8IUD6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 UBE2L2-201ENST00000254302 429 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC079741.1-201ENST00000321498 212 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 SNORD50B-201ENST00000364995 70 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 Y_RNA.506-201ENST00000384494 102 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 Y_RNA.533-201ENST00000384596 114 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AL591034.2-201ENST00000402839 359 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 RPL17P36-201ENST00000420302 549 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 HSPD1P21-201ENST00000436541 245 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AP006289.1-201ENST00000538089 277 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 MIR4284-201ENST00000578924 81 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 RPS29P30-201ENST00000600975 111 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AL158827.2-201ENST00000602494 330 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AL121917.1-203ENST00000605534 577 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC064801.1-201ENST00000612025 407 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AL691447.3-201ENST00000635020 330 ntBASIC5.57□□□□□ -1.52
RNF135Q8IUD6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF135Q8IUD6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RNA5SP223-201ENST00000365174 120 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 U8.8-201ENST00000365399 135 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RNF10P1-201ENST00000418589 369 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC073264.2-201ENST00000448886 166 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC110792.1-201ENST00000491826 472 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC022493.1-201ENST00000492984 337 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RNU1-86P-201ENST00000516108 154 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 MIR892C-201ENST00000516410 77 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RNU1-107P-201ENST00000516617 154 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RNU6-1315P-201ENST00000517187 99 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AP003733.2-201ENST00000529409 171 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC021006.3-201ENST00000530771 192 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms