Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
RFX6Q8HWS3 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
RFX6Q8HWS3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX6Q8HWS3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.79□□□□□ -1.8
RFX6Q8HWS3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RFX6Q8HWS3 AC244517.1-201ENST00000606030 2086 ntBASIC3.79□□□□□ -1.8
RFX6Q8HWS3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU4-76P-201ENST00000364509 141 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU6-483P-201ENST00000384088 108 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 OR51A5P-201ENST00000415429 942 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC245054.1-201ENST00000420944 258 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 OR4K11P-201ENST00000431829 904 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 USP12PX-201ENST00000432383 1057 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 HMGB3P12-201ENST00000438745 556 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC079781.2-201ENST00000446424 169 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC140076.1-201ENST00000449897 361 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 NUTF2P7-201ENST00000453086 375 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC022364.2-201ENST00000457963 554 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AL049714.1-201ENST00000466686 347 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RN7SL132P-201ENST00000478131 296 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RPS3AP50-201ENST00000487064 803 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RPL23AP55-201ENST00000498163 452 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 HMGB3P15-201ENST00000507326 574 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU6-507P-201ENST00000516045 100 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC090572.1-201ENST00000519251 160 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AL359212.1-201ENST00000556608 614 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 MIR5685-201ENST00000579080 79 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AP001429.1-201ENST00000602568 530 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC009994.1-201ENST00000606889 253 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC099654.5-201ENST00000636479 350 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.78□□□□□ -1.8
RFX6Q8HWS3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX6Q8HWS3 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.81
RFX6Q8HWS3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 SNORA51.2-201ENST00000364595 132 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNA5SP235-201ENST00000365411 114 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNU6-637P-201ENST00000384050 107 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNU6-432P-201ENST00000384196 109 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL353193.1-201ENST00000421444 268 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 BEND7P1-201ENST00000422058 457 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 MTND1P14-201ENST00000427400 950 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL133162.1-201ENST00000463228 453 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 SNORA20.3-201ENST00000516880 132 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 RNU6-410P-201ENST00000517006 107 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 MTND1P35-201ENST00000526739 508 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 HSPE1P5-201ENST00000561489 272 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 MIR5187-201ENST00000583479 76 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC098848.2-201ENST00000588023 330 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AL117336.2-201ENST00000602435 335 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC007621.1-201ENST00000604544 437 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX6Q8HWS3 Z84480.1-201ENST00000605131 311 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC008536.2-201ENST00000607284 349 ntBASIC3.77□□□□□ -1.81
RFX6Q8HWS3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms