Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RPS11P1-201ENST00000451072 473 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 PRSS3P4-201ENST00000453323 162 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AC104806.1-201ENST00000508720 308 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 RNA5SP519-201ENST00000516480 119 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 RNU7-30P-201ENST00000516835 62 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AL442663.2-201ENST00000554385 511 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC005668.1-201ENST00000571142 476 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC243960.4-201ENST00000600532 288 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.812-201ENST00000610788 101 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.784-201ENST00000613803 101 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.787-201ENST00000616522 101 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.780-201ENST00000617336 101 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 uc_338.34-201ENST00000617467 174 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.801-201ENST00000619005 101 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.2□□□□□ -1.58
USP48Q86UV5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC139769.1-204ENST00000472297 1931 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AL365440.1-201ENST00000436135 2167 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 OR51H2P-202ENST00000641424 3046 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.19□□□□□ -1.58
USP48Q86UV5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.19□□□□□ -1.58
USP48Q86UV5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP48Q86UV5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP48Q86UV5 RNU1-15P-201ENST00000353977 144 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 SMIM11P1-201ENST00000369586 178 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 RNU6-946P-201ENST00000383878 107 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP48Q86UV5 NDUFS5P1-201ENST00000405668 289 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 MIR1302-11-201ENST00000408051 138 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 MIR1302-9-201ENST00000408365 138 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 MIR1302-10-201ENST00000408734 138 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 RNU6-1148P-201ENST00000410992 104 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.19□□□□□ -1.58
USP48Q86UV5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 HLA-N-201ENST00000437516 135 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AL590639.1-201ENST00000456484 337 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC112206.3-201ENST00000514578 389 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 RNU6-277P-201ENST00000516272 106 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 NARSP2-201ENST00000518524 679 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.19□□□□□ -1.58
USP48Q86UV5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC011611.1-201ENST00000552179 197 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.19□□□□□ -1.58
USP48Q86UV5 MIR4424-201ENST00000585257 86 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AC006116.10-201ENST00000591836 581 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AL160290.3-201ENST00000604869 165 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 AC012468.1-201ENST00000604888 430 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 MIR1302-2-201ENST00000607096 138 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.19□□□□□ -1.58
USP48Q86UV5 AL353748.2-201ENST00000622148 471 ntBASIC5.19□□□□□ -1.58
USP48Q86UV5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP48Q86UV5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP48Q86UV5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP48Q86UV5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.18□□□□□ -1.58
USP48Q86UV5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 RNU6-701P-201ENST00000384059 107 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 MIR449B-201ENST00000384995 97 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 RNU4-46P-201ENST00000410818 138 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 RPS23P10-201ENST00000416185 486 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 NCOR1P3-201ENST00000420479 303 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AL353678.1-201ENST00000422735 741 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.18□□□□□ -1.58
USP48Q86UV5 CALM2P2-201ENST00000428512 440 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.18□□□□□ -1.58
USP48Q86UV5 KCTD9P3-201ENST00000434597 1169 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 MRPL50P4-201ENST00000446432 475 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AL500522.2-201ENST00000448562 343 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 RPL7P49-201ENST00000471402 708 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 RN7SL812P-201ENST00000493791 279 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.18□□□□□ -1.58
USP48Q86UV5 Y_RNA.665-201ENST00000516177 98 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 RNU6-840P-201ENST00000517275 65 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.18□□□□□ -1.58
USP48Q86UV5 AC105029.1-201ENST00000520250 669 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms