Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MTCO1P39-201ENST00000426148 480 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 RPS12P2-201ENST00000439728 269 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 RPS23P3-201ENST00000470993 430 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 RPS27AP9-201ENST00000477681 438 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 MTND2P14-201ENST00000482139 351 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 MIR4637-201ENST00000582405 84 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AP001029.3-201ENST00000588063 596 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 VN1R82P-201ENST00000601481 356 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC005046.1-201ENST00000608515 625 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC245297.2-201ENST00000610119 565 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC231657.1-201ENST00000624313 397 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC007490.1-201ENST00000624321 703 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC138915.3-201ENST00000562908 1389 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 USP9YP33-201ENST00000412220 421 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 USP9YP35-201ENST00000435696 412 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 GAPDHP27-201ENST00000447427 1020 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC026410.2-201ENST00000460281 156 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC012181.1-201ENST00000479895 423 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC093281.2-201ENST00000510153 597 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC105914.1-201ENST00000511798 226 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 SNORA3.4-201ENST00000515969 96 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 FAM60BP-201ENST00000578364 658 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC083760.1-201ENST00000589621 670 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC012119.1-201ENST00000603184 222 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL592221.1-201ENST00000605266 382 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL607023.1-201ENST00000620045 248 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC120349.3-201ENST00000624377 529 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL390862.1-201ENST00000635467 1469 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 SGO1P2-201ENST00000429458 1589 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL079342.1-201ENST00000401460 267 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC104454.1-201ENST00000421341 1401 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC011233.1-201ENST00000422812 283 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC092447.3-201ENST00000426027 686 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC093151.1-201ENST00000427711 313 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 MTATP6P17-201ENST00000431030 672 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RPL23AP74-201ENST00000437246 471 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 ST13P20-201ENST00000447996 1065 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC005297.2-201ENST00000450430 606 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 USP9YP34-201ENST00000453983 808 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC006499.2-201ENST00000513470 337 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RNA5SP385-201ENST00000515947 110 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RNU6-1095P-201ENST00000516148 108 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 Y_RNA.673-201ENST00000516306 88 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC105185.1-201ENST00000518705 535 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 DEFB131D-201ENST00000526803 184 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP003461.1-201ENST00000528866 78 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 DUXAP5-201ENST00000529668 529 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 RANP3-201ENST00000530970 276 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms