Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC074101.1-201ENST00000637861 241 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-989P-201ENST00000362756 107 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 SNORD50.1-201ENST00000362987 71 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 SNORA58B-201ENST00000364259 136 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-171P-201ENST00000384354 107 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-959P-201ENST00000384671 107 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AL031659.1-201ENST00000447075 539 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 NUTF2P3-201ENST00000448540 384 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RN7SL172P-201ENST00000460535 303 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RPS21P4-201ENST00000487122 248 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MRPS33P2-201ENST00000507850 322 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-513P-201ENST00000516104 104 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 OR4H12P-201ENST00000556269 907 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC023824.2-201ENST00000566185 400 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 PRPF19P1-201ENST00000584766 898 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC009318.2-201ENST00000610917 651 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MIR8076-201ENST00000611401 83 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AL450472.3-201ENST00000615578 367 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC240442.1-201ENST00000616055 283 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 AC008725.1-201ENST00000605123 2263 ntBASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LYSMD3Q7Z3D4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 U3.2-201ENST00000362981 210 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AC019155.1-201ENST00000382242 574 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 SNORA67-201ENST00000384423 137 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.534-201ENST00000384599 112 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-1179P-201ENST00000384667 107 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 MIR135A2-201ENST00000384854 100 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 SNORA53-201ENST00000391141 249 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 MIR937-201ENST00000401271 86 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AC108075.1-201ENST00000424692 529 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RNU7-87P-201ENST00000459343 62 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RPS18P6-201ENST00000476880 458 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RN7SL727P-201ENST00000482164 296 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 HMGN1P11-201ENST00000508668 303 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RNU1-86P-201ENST00000516108 154 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 RNU1-107P-201ENST00000516617 154 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AL162424.1-201ENST00000602325 221 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AC069307.1-201ENST00000602820 447 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 AC009314.1-201ENST00000603871 304 ntBASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD3Q7Z3D4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC007685.1-201ENST00000329806 452 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RNU4-90P-201ENST00000362773 141 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RNU1-146P-201ENST00000364015 165 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 SNORA22C-201ENST00000384614 134 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-918P-201ENST00000391219 106 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms