Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CYP4F29P-201ENST00000420685 446 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 RPL7P2-201ENST00000427639 268 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 PSMA6P3-201ENST00000428242 164 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 GPR143P-201ENST00000434155 205 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC010655.1-201ENST00000449336 292 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC104308.1-201ENST00000454621 333 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 PLGLA-201ENST00000465668 449 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC093767.1-201ENST00000504523 156 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC016065.2-201ENST00000514530 444 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC112206.3-201ENST00000514578 389 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 HMGB1P6-201ENST00000569046 646 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC093227.2-201ENST00000589357 285 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC067852.4-201ENST00000590314 478 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC022432.1-201ENST00000595739 310 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 VN1R80P-201ENST00000597126 338 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC021646.1-201ENST00000605469 484 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 DISC2.1-201ENST00000612827 205 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 MIR6864-201ENST00000617935 70 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC006020.1-201ENST00000420179 1854 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 ELL2P4-201ENST00000446870 1376 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 RNA5SP258-201ENST00000362750 119 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AL136116.1-201ENST00000403591 381 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 FAT1P1-201ENST00000406588 507 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 MTCO3P12-201ENST00000416718 547 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC012065.2-201ENST00000421295 375 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 SRIP2-201ENST00000428470 166 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 EZH2P1-201ENST00000431167 291 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 RPS6P12-201ENST00000432491 726 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 CBWD4P-201ENST00000445695 655 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 RNU6-277P-201ENST00000516272 106 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 SUB1P1-201ENST00000524415 382 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AP000907.2-201ENST00000530827 353 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC023050.3-201ENST00000541142 333 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC078814.3-201ENST00000553036 491 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 OR4T1P-201ENST00000554933 911 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 MIR4458-201ENST00000578872 75 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC013553.2-201ENST00000604244 589 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 Z84480.1-201ENST00000605131 311 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC110741.2-201ENST00000605278 268 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF549Q6P9A3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC090229.1-201ENST00000590983 1609 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC011978.2-201ENST00000569835 2054 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 RNU6-223P-201ENST00000362830 107 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AL591416.1-201ENST00000404015 867 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AL445189.1-201ENST00000405722 338 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 SNORA57.3-201ENST00000411095 141 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 DBIP2-201ENST00000419076 262 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 ELOCP4-201ENST00000420090 333 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms