Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.09□□□□□ -1.92
PTCH1Q13635 SNORA14A-201ENST00000364773 135 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 MIR506-201ENST00000384998 124 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 RNU2-47P-201ENST00000410649 186 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.92
PTCH1Q13635 RPL27AP8-201ENST00000424277 446 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.09□□□□□ -1.92
PTCH1Q13635 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.09□□□□□ -1.92
PTCH1Q13635 AC016550.1-201ENST00000505348 785 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.92
PTCH1Q13635 RNU6-1261P-201ENST00000517194 104 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTCH1Q13635 CR383656.7-201ENST00000548164 174 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.92
PTCH1Q13635 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.09□□□□□ -1.92
PTCH1Q13635 TPMTP1-201ENST00000592307 737 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 AC010378.1-201ENST00000619270 362 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 AP003122.6-201ENST00000623831 495 ntBASIC3.09□□□□□ -1.92
PTCH1Q13635 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.92
PTCH1Q13635 AC010733.2-201ENST00000589496 5702 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PTCH1Q13635 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTCH1Q13635 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.08□□□□□ -1.92
PTCH1Q13635 Y_RNA.466-201ENST00000384294 113 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.08□□□□□ -1.92
PTCH1Q13635 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCH1Q13635 RAC1P7-201ENST00000445367 377 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 MTCYBP11-201ENST00000447254 1109 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 SUMO2P2-201ENST00000456482 255 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 PNPLA4P1-201ENST00000458328 305 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTCH1Q13635 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.08□□□□□ -1.92
PTCH1Q13635 AC138915.2-201ENST00000569776 97 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 MIR5708-201ENST00000579723 85 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AC008507.2-201ENST00000588402 1176 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AL645944.1-201ENST00000603857 493 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AL627309.6-201ENST00000606857 840 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AC124016.2-201ENST00000610058 665 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 AL138880.2-201ENST00000616214 239 ntBASIC3.08□□□□□ -1.92
PTCH1Q13635 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCH1Q13635 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCH1Q13635 AC097714.1-201ENST00000511272 1647 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTCH1Q13635 SNRPEP2-201ENST00000397592 279 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTCH1Q13635 RNU6-1140P-201ENST00000410517 106 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 RNU6-321P-201ENST00000410912 106 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.07□□□□□ -1.92
PTCH1Q13635 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCH1Q13635 BEND7P1-201ENST00000422058 457 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC019178.2-201ENST00000423595 505 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC108667.1-201ENST00000428618 249 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 RPL7P54-201ENST00000438336 674 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 MTCYBP42-201ENST00000444653 1130 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCH1Q13635 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTCH1Q13635 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.07□□□□□ -1.92
PTCH1Q13635 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTCH1Q13635 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTCH1Q13635 AP003066.2-201ENST00000529375 555 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC004486.1-201ENST00000546846 233 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCH1Q13635 DNAJC8P1-201ENST00000554535 372 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PTCH1Q13635 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCH1Q13635 AP002802.2-201ENST00000605877 235 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC093673.2-201ENST00000609674 331 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC005332.6-201ENST00000613178 446 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 AC022306.3-201ENST00000619930 550 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCH1Q13635 MKKS-204ENST00000639674 192 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
PTCH1Q13635 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCH1Q13635 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.06□□□□□ -1.92
PTCH1Q13635 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCH1Q13635 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCH1Q13635 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCH1Q13635 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTCH1Q13635 RNU6-707P-201ENST00000364647 95 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 U8.8-201ENST00000365399 135 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 RNU6-882P-201ENST00000391025 103 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AL079342.2-201ENST00000403367 482 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 RPS7P9-201ENST00000414704 586 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 CYCSP49-201ENST00000420810 319 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 EZH2P1-201ENST00000431167 291 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.06□□□□□ -1.92
PTCH1Q13635 PTGES3P1-201ENST00000439531 483 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 TRIM60P18-201ENST00000441518 828 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC093392.2-201ENST00000450682 337 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 OFD1P3Y-201ENST00000453312 783 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC072039.1-201ENST00000477611 581 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.06□□□□□ -1.92
PTCH1Q13635 TBCAP3-201ENST00000512475 312 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms