Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
IRF9Q00978 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 HSPA8P4-201ENST00000511877 1920 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.28□□□□□ -1.72
IRF9Q00978 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
IRF9Q00978 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
IRF9Q00978 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
IRF9Q00978 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 RNU6-254P-201ENST00000363377 107 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 Y_RNA.259-201ENST00000364619 101 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 Y_RNA.315-201ENST00000365117 102 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RNU6-1297P-201ENST00000384415 104 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 MIR3065-201ENST00000390137 79 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
IRF9Q00978 MIR548K-201ENST00000408406 116 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 MIR548F5-201ENST00000408421 86 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.28□□□□□ -1.72
IRF9Q00978 VN1R36P-201ENST00000414936 291 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RPL26P29-201ENST00000415623 438 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 TOMM22P1-201ENST00000418578 312 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AL669831.1-202ENST00000428504 417 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.28□□□□□ -1.72
IRF9Q00978 PRDX3P3-201ENST00000447765 522 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AC107399.1-201ENST00000451226 265 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RNU7-167P-201ENST00000459160 62 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.28□□□□□ -1.72
IRF9Q00978 VN1R17P-201ENST00000472048 1090 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 HMGB1P22-201ENST00000505315 124 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 RNU2-69P-201ENST00000516061 100 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RNU6-566P-201ENST00000516790 107 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.28□□□□□ -1.72
IRF9Q00978 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.28□□□□□ -1.72
IRF9Q00978 AL121821.2-201ENST00000556081 394 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AC012182.1-201ENST00000570133 895 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AC069061.3-201ENST00000582254 823 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AC079587.1-201ENST00000603846 277 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AP001330.4-201ENST00000604350 154 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 APOOP1-201ENST00000604695 592 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AC245389.1-201ENST00000605141 529 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 AL161616.1-201ENST00000611867 286 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.28□□□□□ -1.72
IRF9Q00978 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
IRF9Q00978 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IRF9Q00978 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IRF9Q00978 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IRF9Q00978 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
IRF9Q00978 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IRF9Q00978 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.27□□□□□ -1.73
IRF9Q00978 TMSB10P2-201ENST00000416049 131 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 RPLP0P7-201ENST00000416050 667 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.27□□□□□ -1.73
IRF9Q00978 AL160275.3-201ENST00000423876 471 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 RPEP3-201ENST00000425462 676 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AC012181.1-201ENST00000479895 423 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AP002812.1-201ENST00000495378 474 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.27□□□□□ -1.73
IRF9Q00978 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.27□□□□□ -1.73
IRF9Q00978 IGKV1-32-201ENST00000519290 311 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
IRF9Q00978 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.27□□□□□ -1.73
IRF9Q00978 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.27□□□□□ -1.73
IRF9Q00978 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 MTCO3P23-201ENST00000561363 289 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 MIR4790-201ENST00000577799 79 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 MIR4330-201ENST00000579077 105 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 MIR3672-201ENST00000584290 82 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.27□□□□□ -1.73
IRF9Q00978 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.27□□□□□ -1.73
IRF9Q00978 MIR432-201ENST00000606207 94 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AC015813.4-201ENST00000610469 179 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 RN7SL722P-201ENST00000617780 284 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 RN7SL565P-201ENST00000618246 284 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 AL360181.4-201ENST00000621752 134 ntBASIC4.27□□□□□ -1.73
IRF9Q00978 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IRF9Q00978 AC068254.2-201ENST00000623938 3577 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms