Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 SNORA31.8-201ENST00000516327 108 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 Y_RNA.689-201ENST00000516589 107 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 PSMA2P1-201ENST00000526365 646 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.09□□□□□ -1.59
HDLBPQ00341 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.09□□□□□ -1.59
HDLBPQ00341 AC037471.2-201ENST00000564941 598 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.09□□□□□ -1.59
HDLBPQ00341 AC005668.1-201ENST00000571142 476 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC005951.2-201ENST00000576282 495 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 MIR4719-201ENST00000585233 84 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC002545.1-201ENST00000592511 181 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC245389.1-201ENST00000605141 529 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AC009248.2-201ENST00000619826 254 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 AL136221.1-201ENST00000621449 509 ntBASIC5.09□□□□□ -1.59
HDLBPQ00341 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.09□□□□□ -1.59
HDLBPQ00341 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.09□□□□□ -1.59
HDLBPQ00341 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.09□□□□□ -1.59
HDLBPQ00341 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
HDLBPQ00341 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.09□□□□□ -1.6
HDLBPQ00341 RLIMP1-201ENST00000339626 1680 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.08□□□□□ -1.6
HDLBPQ00341 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 Y_RNA.61-201ENST00000362835 102 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 RNU6-116P-201ENST00000384042 109 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 SNORA32.2-201ENST00000384049 122 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 RNU1-44P-201ENST00000384453 163 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 MIR514A1-201ENST00000385133 98 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 RPL21P65-201ENST00000406094 466 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.08□□□□□ -1.6
HDLBPQ00341 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.08□□□□□ -1.6
HDLBPQ00341 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 AL590383.1-201ENST00000428602 75 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 PRDX3P3-201ENST00000447765 522 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AC104058.1-201ENST00000448028 297 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 Y_RNA.654-201ENST00000497848 106 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 RBBP4P6-201ENST00000508098 202 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.08□□□□□ -1.6
HDLBPQ00341 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 ATP5F1P5-201ENST00000526403 760 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 RAB11AP2-201ENST00000545905 639 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.08□□□□□ -1.6
HDLBPQ00341 uc_338.5-201ENST00000611839 155 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AC005086.4-201ENST00000623065 213 ntBASIC5.08□□□□□ -1.6
HDLBPQ00341 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.08□□□□□ -1.6
HDLBPQ00341 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.08□□□□□ -1.6
HDLBPQ00341 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.08□□□□□ -1.6
HDLBPQ00341 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.08□□□□□ -1.6
HDLBPQ00341 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.08□□□□□ -1.6
HDLBPQ00341 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDLBPQ00341 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HDLBPQ00341 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDLBPQ00341 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDLBPQ00341 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDLBPQ00341 Y_RNA.530-201ENST00000384587 101 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AL121834.1-202ENST00000404494 277 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AL591212.2-201ENST00000433923 257 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 AC073587.1-201ENST00000447093 876 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AL590639.1-201ENST00000456484 337 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AC087588.1-201ENST00000462203 316 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AC004801.2-202ENST00000463559 283 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AC091153.1-201ENST00000466297 402 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AL049874.1-201ENST00000489560 388 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 RN7SL604P-201ENST00000492589 296 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 SCARNA15.2-201ENST00000516409 127 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 RN7SKP256-201ENST00000517201 314 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 BTF3P12-201ENST00000519620 469 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AC090151.1-201ENST00000520784 730 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 IFITM8P-201ENST00000522529 394 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AP004242.1-201ENST00000533701 349 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.07□□□□□ -1.6
HDLBPQ00341 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.07□□□□□ -1.6
HDLBPQ00341 AL117336.2-201ENST00000602435 335 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 C8orf59P2-201ENST00000603441 271 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 DPPA3P3-201ENST00000603842 430 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 AC034102.8-201ENST00000615146 484 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.07□□□□□ -1.6
HDLBPQ00341 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDLBPQ00341 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
HDLBPQ00341 AP004289.2-201ENST00000444413 1457 ntBASIC5.07□□□□□ -1.6
HDLBPQ00341 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.06□□□□□ -1.6
HDLBPQ00341 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HDLBPQ00341 MTND4P35-201ENST00000604257 1375 ntBASIC5.06□□□□□ -1.6
HDLBPQ00341 RNA5SP52-201ENST00000362448 134 ntBASIC5.06□□□□□ -1.6
HDLBPQ00341 RNA5SP502-201ENST00000362694 119 ntBASIC5.06□□□□□ -1.6
HDLBPQ00341 MIR23B-201ENST00000384832 97 ntBASIC5.06□□□□□ -1.6
HDLBPQ00341 RN7SKP202-201ENST00000410439 330 ntBASIC5.06□□□□□ -1.6
HDLBPQ00341 RNA5SP146-201ENST00000410743 123 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms