Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR3935-201ENST00000583472 104 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 AC073413.2-201ENST00000604332 360 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 AC011472.4-201ENST00000615848 491 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
HSPG2P98160 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.77□□□□□ -2.29
HSPG2P98160 AL121871.1-201ENST00000443413 436 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.77□□□□□ -2.29
HSPG2P98160 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HSPG2P98160 SNORD56.5-201ENST00000364281 72 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 RN7SKP51-201ENST00000410781 304 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.77□□□□□ -2.29
HSPG2P98160 AC114973.1-201ENST00000429057 632 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 MTND4LP12-201ENST00000448237 295 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 AC092754.2-201ENST00000463506 460 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 RNU1-104P-201ENST00000517280 175 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 AC011468.4-201ENST00000603942 409 ntBASIC0.77□□□□□ -2.29
HSPG2P98160 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HSPG2P98160 AC018630.2-201ENST00000534866 2403 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
HSPG2P98160 Y_RNA.60-201ENST00000362831 98 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 U8.1-201ENST00000362843 134 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 RNU6-198P-201ENST00000384258 104 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 MTND2P16-201ENST00000419987 799 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 IFNA20P-201ENST00000436840 528 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.76□□□□□ -2.29
HSPG2P98160 RNU6-56P-201ENST00000516986 93 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.76□□□□□ -2.29
HSPG2P98160 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HSPG2P98160 DUXAP3-201ENST00000603616 594 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AL135786.2-201ENST00000608422 615 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AL138955.1-201ENST00000622881 1040 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AC007342.9-201ENST00000623877 1385 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 RPL23AP47-201ENST00000408017 460 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 HMGB1P49-201ENST00000418882 569 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AL691517.1-201ENST00000440833 1235 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 HMGB3P21-201ENST00000452483 547 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.76□□□□□ -2.29
HSPG2P98160 KATNBL1P4-201ENST00000503545 918 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AC022447.3-201ENST00000506865 495 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.76□□□□□ -2.29
HSPG2P98160 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
HSPG2P98160 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HSPG2P98160 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.76□□□□□ -2.29
HSPG2P98160 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.76□□□□□ -2.29
HSPG2P98160 AC091057.2-201ENST00000602594 792 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 MTND5P9-201ENST00000503854 1755 ntBASIC0.76□□□□□ -2.29
HSPG2P98160 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.75□□□□□ -2.29
HSPG2P98160 RPL21P104-201ENST00000464143 478 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC096571.1-202ENST00000506634 735 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC239860.2-201ENST00000525886 270 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AP003033.1-201ENST00000527244 415 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 VN1R107P-201ENST00000601784 209 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 MIR7974-201ENST00000615835 79 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC011330.2-201ENST00000621680 635 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 DEFB108F-201ENST00000344638 222 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 ARL5AP3-201ENST00000439327 386 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.75□□□□□ -2.29
HSPG2P98160 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.75□□□□□ -2.29
HSPG2P98160 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.75□□□□□ -2.29
HSPG2P98160 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HSPG2P98160 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.75□□□□□ -2.29
HSPG2P98160 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HSPG2P98160 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
HSPG2P98160 AC006270.2-201ENST00000578523 652 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC097468.3-201ENST00000607956 456 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.75□□□□□ -2.29
HSPG2P98160 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
HSPG2P98160 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.75□□□□□ -2.29
HSPG2P98160 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.75□□□□□ -2.29
HSPG2P98160 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.75□□□□□ -2.29
HSPG2P98160 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.75□□□□□ -2.29
HSPG2P98160 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HSPG2P98160 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
HSPG2P98160 OR1L1-202ENST00000373686 1083 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.75□□□□□ -2.29
HSPG2P98160 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.75□□□□□ -2.29
HSPG2P98160 LSM1P1-201ENST00000438629 273 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC113155.1-201ENST00000511141 769 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AC010625.1-201ENST00000511296 403 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 AL109933.3-201ENST00000619095 188 ntBASIC0.75□□□□□ -2.29
HSPG2P98160 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
HSPG2P98160 RNA5SP393-201ENST00000363423 117 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 HSPE1P26-201ENST00000405341 275 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 MORF4L1P7-201ENST00000426038 703 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.74□□□□□ -2.29
HSPG2P98160 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 HMGB3P30-201ENST00000457863 606 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 RPL21P131-201ENST00000497298 483 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 OR5AQ1P-201ENST00000527596 927 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 MIR4474-201ENST00000579189 78 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
HSPG2P98160 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
HSPG2P98160 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 Y_RNA.85-201ENST00000363014 111 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 HMGN2P20-201ENST00000437531 273 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms