Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
PRKDCP78527 RNU6-716P-201ENST00000365621 103 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC092902.1-201ENST00000486999 259 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 SETP2-201ENST00000553886 926 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC090953.1-201ENST00000604305 1092 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC010487.4-201ENST00000637027 61 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 Y_RNA.60-201ENST00000362831 98 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC008850.1-201ENST00000427546 362 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 RNA5SP330-201ENST00000517096 96 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.92□□□□□ -2.26
PRKDCP78527 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.92□□□□□ -2.26
PRKDCP78527 AC011477.1-204ENST00000623416 1325 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
PRKDCP78527 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
PRKDCP78527 AC109780.2-201ENST00000413467 845 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.92□□□□□ -2.26
PRKDCP78527 RPL7P53-201ENST00000421245 739 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC018630.2-202ENST00000422992 927 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 AC098934.3-201ENST00000430450 190 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 OR6C73P-201ENST00000546432 358 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 YWHAQP7-201ENST00000603536 658 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 uc_338.12-201ENST00000616344 181 ntBASIC0.92□□□□□ -2.26
PRKDCP78527 RNU1-148P-201ENST00000384472 162 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AL139109.1-201ENST00000455491 297 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 SNX5P1-201ENST00000505757 1041 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AP004607.1-201ENST00000524456 203 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC097468.3-201ENST00000607956 456 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 RNU6-198P-201ENST00000384258 104 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 AL358176.2-201ENST00000425769 204 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AL596276.1-201ENST00000434465 418 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC104308.1-201ENST00000454621 333 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 SNORD121B-201ENST00000458838 81 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 LDHBP3-201ENST00000514909 822 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.91□□□□□ -2.26
PRKDCP78527 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 AC010200.2-201ENST00000605098 235 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC090425.2-201ENST00000608818 501 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 AC139103.1-201ENST00000534696 1030 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AL161713.1-201ENST00000555538 145 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC005156.1-201ENST00000613371 573 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
PRKDCP78527 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
PRKDCP78527 U8.1-201ENST00000362843 134 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 RNA5SP489-201ENST00000410986 109 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 AC092754.2-201ENST00000463506 460 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
PRKDCP78527 RNU6-711P-201ENST00000517255 106 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AF279873.1-201ENST00000523393 313 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 MIR4474-201ENST00000579189 78 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 AC090617.7-201ENST00000623952 126 ntBASIC0.91□□□□□ -2.26
PRKDCP78527 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
PRKDCP78527 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.9□□□□□ -2.26
PRKDCP78527 AL161722.3-201ENST00000605789 2983 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 AP000560.1-201ENST00000624150 1937 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 MIR1304-201ENST00000408243 91 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 AC146507.1-201ENST00000468335 354 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.9□□□□□ -2.26
PRKDCP78527 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 AL590099.1-201ENST00000615276 138 ntBASIC0.9□□□□□ -2.26
PRKDCP78527 AL136164.4-201ENST00000625013 2135 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
PRKDCP78527 RPL23AP47-201ENST00000408017 460 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.9□□□□□ -2.27
PRKDCP78527 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.9□□□□□ -2.27
PRKDCP78527 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.9□□□□□ -2.27
PRKDCP78527 CLIC4P1-201ENST00000453177 535 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 PRELID3BP4-201ENST00000515476 571 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 AC090821.2-201ENST00000523552 176 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 AC233266.2-201ENST00000567067 528 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 CBX3P2-202ENST00000583365 535 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.9□□□□□ -2.27
PRKDCP78527 KATNBL1P4-201ENST00000503545 918 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 OR5H4P-201ENST00000510851 923 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.9□□□□□ -2.27
PRKDCP78527 LRRC34P2-201ENST00000514850 553 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 RN7SKP34-201ENST00000516142 244 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 AP003033.1-201ENST00000527244 415 ntBASIC0.9□□□□□ -2.27
PRKDCP78527 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.9□□□□□ -2.27
PRKDCP78527 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
PRKDCP78527 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
PRKDCP78527 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
PRKDCP78527 Y_RNA.85-201ENST00000363014 111 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 HSPE1P26-201ENST00000405341 275 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.89□□□□□ -2.27
PRKDCP78527 MTND4P34-201ENST00000572715 1371 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AC018630.2-201ENST00000534866 2403 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 DEFB108F-201ENST00000344638 222 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms