Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC107393.1-201ENST00000512403 346 ntBASIC1.46□□□□□ -2.18
UBA52P62987 RNU6-250P-201ENST00000516958 103 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.46□□□□□ -2.18
UBA52P62987 AP005902.1-201ENST00000521358 186 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.46□□□□□ -2.18
UBA52P62987 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.46□□□□□ -2.18
UBA52P62987 UBE2L4-201ENST00000587688 464 ntBASIC1.46□□□□□ -2.18
UBA52P62987 OR4G1P-201ENST00000588632 938 ntBASIC1.46□□□□□ -2.18
UBA52P62987 XIAPP1-201ENST00000603162 600 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AL035411.2-201ENST00000604022 421 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AC106900.2-201ENST00000604994 317 ntBASIC1.46□□□□□ -2.18
UBA52P62987 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AL133370.2-201ENST00000619934 439 ntBASIC1.46□□□□□ -2.18
UBA52P62987 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
UBA52P62987 RNU6-661P-201ENST00000362409 107 ntBASIC1.45□□□□□ -2.18
UBA52P62987 U8.3-201ENST00000363321 132 ntBASIC1.45□□□□□ -2.18
UBA52P62987 RNU6-244P-201ENST00000391028 104 ntBASIC1.45□□□□□ -2.18
UBA52P62987 PTGES3P2-201ENST00000407942 482 ntBASIC1.45□□□□□ -2.18
UBA52P62987 RNU6-321P-201ENST00000410912 106 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.45□□□□□ -2.18
UBA52P62987 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AL356867.1-201ENST00000429623 299 ntBASIC1.45□□□□□ -2.18
UBA52P62987 HMGB1P27-201ENST00000431429 603 ntBASIC1.45□□□□□ -2.18
UBA52P62987 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBA52P62987 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AC079203.1-201ENST00000487972 404 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC104685.1-201ENST00000502445 371 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.45□□□□□ -2.18
UBA52P62987 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.45□□□□□ -2.18
UBA52P62987 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.45□□□□□ -2.18
UBA52P62987 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC067805.1-201ENST00000559344 470 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.45□□□□□ -2.18
UBA52P62987 AC007229.1-201ENST00000590455 412 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.6-201ENST00000603753 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.11-201ENST00000604059 253 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.10-201ENST00000604330 253 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AP001330.4-201ENST00000604350 154 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC008162.1-201ENST00000604718 254 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.1-201ENST00000604752 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.2-201ENST00000604983 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.5-201ENST00000605253 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.4-201ENST00000605279 254 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.12-201ENST00000605291 253 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.8-201ENST00000605353 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.9-201ENST00000605428 253 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AL670379.7-201ENST00000605823 252 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.45□□□□□ -2.18
UBA52P62987 AC005296.1-201ENST00000616145 209 ntBASIC1.45□□□□□ -2.18
UBA52P62987 AC091953.2-201ENST00000623979 160 ntBASIC1.45□□□□□ -2.18
UBA52P62987 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
UBA52P62987 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBA52P62987 AC004520.1-201ENST00000608362 1413 ntBASIC1.44□□□□□ -2.18
UBA52P62987 RNU6-263P-201ENST00000363811 107 ntBASIC1.44□□□□□ -2.18
UBA52P62987 Z98749.2-208ENST00000381646 500 ntBASIC1.44□□□□□ -2.18
UBA52P62987 RNU6-198P-201ENST00000384258 104 ntBASIC1.44□□□□□ -2.18
UBA52P62987 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AL021407.1-201ENST00000404531 386 ntBASIC1.44□□□□□ -2.18
UBA52P62987 MIR1294-201ENST00000408503 142 ntBASIC1.44□□□□□ -2.18
UBA52P62987 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 AC009237.2-201ENST00000421358 284 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.44□□□□□ -2.18
UBA52P62987 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 USP12PX-201ENST00000432383 1057 ntBASIC1.44□□□□□ -2.18
UBA52P62987 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
UBA52P62987 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 AL360221.1-201ENST00000445989 335 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AL034418.1-201ENST00000448675 860 ntBASIC1.44□□□□□ -2.18
UBA52P62987 CDC42P1-201ENST00000456658 548 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC087588.1-201ENST00000462203 316 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 AC022447.3-201ENST00000506865 495 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 RNU2-19P-201ENST00000517288 84 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.44□□□□□ -2.18
UBA52P62987 SNRPGP16-201ENST00000533275 226 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC022880.1-201ENST00000534017 973 ntBASIC1.44□□□□□ -2.18
UBA52P62987 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.44□□□□□ -2.18
UBA52P62987 AC090751.1-201ENST00000566966 267 ntBASIC1.44□□□□□ -2.18
UBA52P62987 MIR4287-201ENST00000579398 78 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.44□□□□□ -2.18
UBA52P62987 MIR502-201ENST00000606349 86 ntBASIC1.44□□□□□ -2.18
UBA52P62987 AC097372.4-201ENST00000625025 466 ntBASIC1.44□□□□□ -2.18
UBA52P62987 DDX10P1-201ENST00000448545 1933 ntBASIC1.44□□□□□ -2.18
UBA52P62987 RNY1P10-201ENST00000363268 113 ntBASIC1.43□□□□□ -2.18
UBA52P62987 RNU4-42P-201ENST00000364738 142 ntBASIC1.43□□□□□ -2.18
UBA52P62987 MIR493-201ENST00000385254 89 ntBASIC1.43□□□□□ -2.18
UBA52P62987 RPS3AP24-201ENST00000407896 734 ntBASIC1.43□□□□□ -2.18
UBA52P62987 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
UBA52P62987 RNU4-74P-201ENST00000411280 161 ntBASIC1.43□□□□□ -2.18
UBA52P62987 Z82205.1-201ENST00000428456 297 ntBASIC1.43□□□□□ -2.18
UBA52P62987 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.43□□□□□ -2.18
UBA52P62987 BX248409.1-201ENST00000455497 255 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms