Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
CLDN20P56880 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN20P56880 RNU6-1284P-201ENST00000363701 100 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 SNORD6-201ENST00000365444 73 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 MIR23B-201ENST00000384832 97 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 MIR670-201ENST00000390142 98 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 RNU2-71P-201ENST00000411395 189 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN20P56880 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN20P56880 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN20P56880 AL662791.1-201ENST00000441992 928 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN20P56880 C1DP4-201ENST00000455429 424 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 CEACAMP4-201ENST00000457676 421 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 RPL9P33-201ENST00000484311 566 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 FCF1P3-201ENST00000496394 590 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN20P56880 PHBP14-201ENST00000512887 367 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AC010493.1-201ENST00000513479 292 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 RN7SKP18-201ENST00000516005 275 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 SNORA31.8-201ENST00000516327 108 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 IGKV2-23-201ENST00000518729 323 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AC026403.1-201ENST00000518938 295 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AC128657.1-201ENST00000549459 145 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 MED28P6-201ENST00000558776 231 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AL845331.3-202ENST00000562856 261 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN20P56880 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN20P56880 MIR3690-201ENST00000580266 75 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN20P56880 AC012531.5-201ENST00000611375 151 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN20P56880 SNHG22-203ENST00000617833 660 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 AL133383.2-201ENST00000622958 2336 ntBASIC3.28□□□□□ -1.88
CLDN20P56880 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CLDN20P56880 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.89
CLDN20P56880 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 AC010733.2-201ENST00000589496 5702 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 DEFB108F-201ENST00000344638 222 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 RNU6-511P-201ENST00000363496 107 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 TXNP7-201ENST00000406296 293 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 Y_RNA.619-201ENST00000410951 90 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AC006989.1-201ENST00000427212 131 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 OR2B8P-201ENST00000432841 938 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN20P56880 HMGB1P29-201ENST00000505659 499 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN20P56880 RNU2-10P-201ENST00000516375 211 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 RNU6-840P-201ENST00000517275 65 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AP003072.2-201ENST00000527756 676 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AC016957.1-201ENST00000534895 309 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN20P56880 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN20P56880 AC006023.2-201ENST00000609916 167 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN20P56880 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN20P56880 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN20P56880 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN20P56880 AL513302.2-201ENST00000562313 1842 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN20P56880 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CLDN20P56880 CR848007.1-201ENST00000442354 1699 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
CLDN20P56880 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 HSPE1P11-201ENST00000339579 310 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 Y_RNA.6-201ENST00000362350 114 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 SNORD56.2-201ENST00000363242 71 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RNU6-169P-201ENST00000365336 107 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 Y_RNA.516-201ENST00000384541 124 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RNU6-328P-201ENST00000390887 106 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 AC069157.1-201ENST00000421749 137 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms