Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HDAC4P56524 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC009093.8-201ENST00000641769 292 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.67□□□□□ -1.82
HDAC4P56524 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HDAC4P56524 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 OR5J1P-201ENST00000313544 939 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 RNU6-882P-201ENST00000391025 103 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AL136116.1-201ENST00000403591 381 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 FCF1P10-201ENST00000407590 479 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 RNU2-43P-201ENST00000410306 190 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 RNU6-195P-201ENST00000411352 109 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC4P56524 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC4P56524 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC4P56524 MTND1P21-201ENST00000412991 285 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 TRIAP1P1-201ENST00000427062 225 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 FTH1P1-201ENST00000437933 532 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC004866.2-201ENST00000438285 481 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 RABEPKP1-201ENST00000440529 1026 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 RAC1P7-201ENST00000445367 377 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 FTH1P25-201ENST00000447665 469 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 TPT1P14-201ENST00000448018 505 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC4P56524 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC4P56524 snoU109.1-201ENST00000459339 135 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC106707.2-201ENST00000484182 374 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC138853.1-201ENST00000503549 823 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 SNORA18.6-201ENST00000516792 115 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AP003392.2-201ENST00000527269 208 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.66□□□□□ -1.82
HDAC4P56524 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC4P56524 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC4P56524 AL356432.3-201ENST00000568952 465 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC4P56524 CKS1BP3-201ENST00000600888 237 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC4P56524 AC091834.1-201ENST00000614543 472 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC112204.3-201ENST00000623822 332 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC091953.2-201ENST00000623979 160 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AC010149.2-201ENST00000637608 315 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 AC092447.7-201ENST00000422212 1621 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC4P56524 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC4P56524 MAPK10-362ENST00000641864 4484 ntBASIC3.66□□□□□ -1.82
HDAC4P56524 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.65□□□□□ -1.82
HDAC4P56524 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.82
HDAC4P56524 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HDAC4P56524 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
HDAC4P56524 RNU6-637P-201ENST00000384050 107 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 Y_RNA.516-201ENST00000384541 124 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HDAC4P56524 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 Y_RNA.619-201ENST00000410951 90 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AF274854.1-201ENST00000413236 615 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 SSXP9-201ENST00000417503 292 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 MTCO1P39-201ENST00000426148 480 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
HDAC4P56524 ATP5JP1-201ENST00000431631 322 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 RPL7P5-201ENST00000471472 736 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AC023598.1-201ENST00000472521 361 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 AC022483.1-201ENST00000514020 567 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 GMPSP1-201ENST00000514075 579 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 AC026403.1-201ENST00000518938 295 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.65□□□□□ -1.83
HDAC4P56524 MTCYBP20-201ENST00000524239 1129 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.65□□□□□ -1.83
HDAC4P56524 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.65□□□□□ -1.83
HDAC4P56524 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.65□□□□□ -1.83
HDAC4P56524 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC4P56524 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AL161729.4-201ENST00000604650 476 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 AL034408.1-202ENST00000636088 415 ntBASIC3.65□□□□□ -1.83
HDAC4P56524 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HDAC4P56524 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HDAC4P56524 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms