Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 AC005183.1-201ENST00000603687 1979 ntBASIC3.23□□□□□ -1.89
LHX1P48742 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LHX1P48742 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LHX1P48742 Y_RNA.46-201ENST00000362695 102 ntBASIC3.23□□□□□ -1.89
LHX1P48742 RNU6-533P-201ENST00000384144 107 ntBASIC3.23□□□□□ -1.89
LHX1P48742 MIR19A-201ENST00000384878 82 ntBASIC3.23□□□□□ -1.89
LHX1P48742 UBA52P6-201ENST00000399822 382 ntBASIC3.23□□□□□ -1.89
LHX1P48742 RPS20P2-201ENST00000402520 389 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AL021407.1-201ENST00000404531 386 ntBASIC3.23□□□□□ -1.89
LHX1P48742 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.23□□□□□ -1.89
LHX1P48742 AC078974.1-201ENST00000411597 223 ntBASIC3.23□□□□□ -1.89
LHX1P48742 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.23□□□□□ -1.89
LHX1P48742 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.23□□□□□ -1.89
LHX1P48742 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 RPL17P12-201ENST00000413391 526 ntBASIC3.23□□□□□ -1.89
LHX1P48742 RPS7P13-201ENST00000413955 498 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC009518.2-201ENST00000418056 731 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC090960.1-201ENST00000421072 306 ntBASIC3.23□□□□□ -1.89
LHX1P48742 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.23□□□□□ -1.89
LHX1P48742 AC091390.3-201ENST00000426478 338 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 RPL22P17-201ENST00000438729 315 ntBASIC3.23□□□□□ -1.89
LHX1P48742 NANOGNBP1-201ENST00000448444 480 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC112204.1-201ENST00000502591 103 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.23□□□□□ -1.89
LHX1P48742 RNU6-840P-201ENST00000517275 65 ntBASIC3.23□□□□□ -1.89
LHX1P48742 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.23□□□□□ -1.89
LHX1P48742 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LHX1P48742 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.23□□□□□ -1.89
LHX1P48742 AC022080.3-201ENST00000544433 482 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.23□□□□□ -1.89
LHX1P48742 AC105129.3-201ENST00000605455 485 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC093732.2-201ENST00000607950 274 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC007038.2-201ENST00000608095 740 ntBASIC3.23□□□□□ -1.89
LHX1P48742 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
LHX1P48742 AC093838.1-201ENST00000613014 469 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC027807.2-201ENST00000616099 408 ntBASIC3.23□□□□□ -1.89
LHX1P48742 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.23□□□□□ -1.89
LHX1P48742 AL138713.1-201ENST00000624026 2130 ntBASIC3.23□□□□□ -1.89
LHX1P48742 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
LHX1P48742 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.22□□□□□ -1.89
LHX1P48742 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
LHX1P48742 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
LHX1P48742 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LHX1P48742 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 RNU6-223P-201ENST00000362830 107 ntBASIC3.22□□□□□ -1.89
LHX1P48742 SNORA23-201ENST00000365128 182 ntBASIC3.22□□□□□ -1.89
LHX1P48742 MIR493-201ENST00000385254 89 ntBASIC3.22□□□□□ -1.89
LHX1P48742 MIR1290-201ENST00000408735 78 ntBASIC3.22□□□□□ -1.89
LHX1P48742 U3.42-201ENST00000408746 214 ntBASIC3.22□□□□□ -1.89
LHX1P48742 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 UBE2FP1-201ENST00000416536 447 ntBASIC3.22□□□□□ -1.89
LHX1P48742 UBE2D3P2-201ENST00000424409 445 ntBASIC3.22□□□□□ -1.89
LHX1P48742 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
LHX1P48742 AL390023.1-201ENST00000428836 262 ntBASIC3.22□□□□□ -1.89
LHX1P48742 AL162389.1-201ENST00000449233 177 ntBASIC3.22□□□□□ -1.89
LHX1P48742 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.22□□□□□ -1.89
LHX1P48742 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.22□□□□□ -1.89
LHX1P48742 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
LHX1P48742 GMPSP1-201ENST00000514075 579 ntBASIC3.22□□□□□ -1.89
LHX1P48742 AP000857.1-201ENST00000532151 543 ntBASIC3.22□□□□□ -1.89
LHX1P48742 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.22□□□□□ -1.89
LHX1P48742 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.22□□□□□ -1.89
LHX1P48742 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.22□□□□□ -1.89
LHX1P48742 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.22□□□□□ -1.89
LHX1P48742 AL355472.4-201ENST00000610233 626 ntBASIC3.22□□□□□ -1.89
LHX1P48742 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.22□□□□□ -1.89
LHX1P48742 AC068057.2-201ENST00000624047 895 ntBASIC3.22□□□□□ -1.89
LHX1P48742 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LHX1P48742 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LHX1P48742 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.21□□□□□ -1.9
LHX1P48742 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LHX1P48742 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
LHX1P48742 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.21□□□□□ -1.9
LHX1P48742 RNU5E-5P-201ENST00000365379 116 ntBASIC3.21□□□□□ -1.9
LHX1P48742 MIR23A-201ENST00000385245 73 ntBASIC3.21□□□□□ -1.9
LHX1P48742 SNORA26.8-201ENST00000391306 124 ntBASIC3.21□□□□□ -1.9
LHX1P48742 AL109755.1-201ENST00000401791 649 ntBASIC3.21□□□□□ -1.9
LHX1P48742 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
LHX1P48742 NPM1P11-201ENST00000417106 855 ntBASIC3.21□□□□□ -1.9
LHX1P48742 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.21□□□□□ -1.9
LHX1P48742 AC008850.1-201ENST00000427546 362 ntBASIC3.21□□□□□ -1.9
LHX1P48742 RPL7L1P10-201ENST00000427790 463 ntBASIC3.21□□□□□ -1.9
LHX1P48742 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
LHX1P48742 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.21□□□□□ -1.9
LHX1P48742 AL049734.2-201ENST00000441066 616 ntBASIC3.21□□□□□ -1.9
LHX1P48742 COX6CP12-201ENST00000446748 202 ntBASIC3.21□□□□□ -1.9
LHX1P48742 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms