Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.06□□□□□ -1.76
TM4SF4P48230 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TM4SF4P48230 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TM4SF4P48230 HSPE1P11-201ENST00000339579 310 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 SNORD56.2-201ENST00000363242 71 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 RNU1-39P-201ENST00000383897 165 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 Y_RNA.517-201ENST00000384551 106 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 Y_RNA.582-201ENST00000391023 95 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TM4SF4P48230 AL359634.1-202ENST00000404721 284 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 RNU4-47P-201ENST00000410876 114 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.06□□□□□ -1.76
TM4SF4P48230 RAC1P6-201ENST00000423911 575 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC007283.2-201ENST00000424739 197 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 RPS24P1-201ENST00000438550 371 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 MTND1P34-201ENST00000438556 671 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.06□□□□□ -1.76
TM4SF4P48230 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.06□□□□□ -1.76
TM4SF4P48230 AL359385.1-201ENST00000456509 365 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.06□□□□□ -1.76
TM4SF4P48230 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.06□□□□□ -1.76
TM4SF4P48230 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.06□□□□□ -1.76
TM4SF4P48230 RN7SL432P-201ENST00000484057 298 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 SNORA70.16-201ENST00000516390 95 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
TM4SF4P48230 AC245505.1-201ENST00000556398 224 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.06□□□□□ -1.76
TM4SF4P48230 RPL12P50-201ENST00000603116 116 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC006023.1-201ENST00000603944 259 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AL161729.4-201ENST00000604650 476 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 AC073534.2-201ENST00000620377 381 ntBASIC4.06□□□□□ -1.76
TM4SF4P48230 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TM4SF4P48230 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TM4SF4P48230 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
TM4SF4P48230 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TM4SF4P48230 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TM4SF4P48230 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC090740.1-201ENST00000623193 2262 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 NEAT1-202ENST00000501122 22743 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TM4SF4P48230 RNU4-75P-201ENST00000364621 146 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TM4SF4P48230 MIR493-201ENST00000385254 89 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 MTHFD2P2-201ENST00000407725 247 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC133104.1-201ENST00000429100 218 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AL589823.1-201ENST00000429577 183 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AL158071.1-201ENST00000430315 461 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 FCF1P1-201ENST00000432690 571 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.05□□□□□ -1.76
TM4SF4P48230 NANOGNBP1-201ENST00000448444 480 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 TPT1P7-201ENST00000458300 517 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC025554.1-201ENST00000505641 188 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC110794.1-201ENST00000505816 425 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 SCARNA15.2-201ENST00000516409 127 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 RNA5SP291-201ENST00000517222 105 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.05□□□□□ -1.76
TM4SF4P48230 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC124947.2-202ENST00000552735 133 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AL845331.3-202ENST00000562856 261 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
TM4SF4P48230 MIR4293-201ENST00000584305 78 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 MIR4276-201ENST00000584832 70 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC078795.2-201ENST00000602835 1252 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC012557.2-201ENST00000605919 418 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC122108.2-201ENST00000611946 526 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 AC098679.4-201ENST00000624241 654 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.05□□□□□ -1.76
TM4SF4P48230 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TM4SF4P48230 SRP72P2-201ENST00000344851 1979 ntBASIC4.05□□□□□ -1.76
TM4SF4P48230 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TM4SF4P48230 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF4P48230 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TM4SF4P48230 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM4SF4P48230 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
TM4SF4P48230 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TM4SF4P48230 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM4SF4P48230 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
TM4SF4P48230 RNU6-7-201ENST00000364784 107 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 RNU6-8-201ENST00000365467 107 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 TMEM167AP1-201ENST00000423409 219 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF4P48230 USP9YP14-201ENST00000430663 563 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 HMGB1P27-201ENST00000431429 603 ntBASIC4.04□□□□□ -1.76
TM4SF4P48230 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF4P48230 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF4P48230 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.04□□□□□ -1.76
TM4SF4P48230 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF4P48230 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF4P48230 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms