Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNORA27.3-201ENST00000364937 134 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 MIR525-201ENST00000384978 85 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 MT-TC-201ENST00000387405 66 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC092638.1-201ENST00000411966 1275 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A5P29400 MTCO1P31-201ENST00000506355 492 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A5P29400 RNU6-488P-201ENST00000515918 99 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 SNORA31.13-201ENST00000516624 135 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC022690.1-201ENST00000526681 550 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC092470.1-201ENST00000546187 132 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A5P29400 DUXAP3-201ENST00000603616 594 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 SEPT7P9-203ENST00000604116 343 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AL355810.1-201ENST00000614629 552 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AL138880.2-201ENST00000616214 239 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC020923.1-201ENST00000624021 917 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 Y_RNA.205-201ENST00000364128 113 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 TAF9BP2-201ENST00000400856 499 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 RFESDP1-201ENST00000422350 461 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC068135.1-201ENST00000446164 246 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 RPS29P29-201ENST00000456396 171 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A5P29400 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC239860.2-201ENST00000525886 270 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A5P29400 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A5P29400 SNORD84-203ENST00000584275 78 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 OR10AB1P-201ENST00000609613 938 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A5P29400 AC068831.7-201ENST00000616954 363 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 MIR6076-201ENST00000617521 113 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 STMN1P1-201ENST00000617809 440 ntBASIC1.83□□□□□ -2.12
COL4A5P29400 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A5P29400 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A5P29400 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A5P29400 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A5P29400 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL4A5P29400 DSTNP4-201ENST00000399472 474 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 TATDN1P1-201ENST00000414123 891 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 LINC01347-201ENST00000417964 355 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A5P29400 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A5P29400 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 MTCYBP45-201ENST00000435243 565 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 MTCYBP34-201ENST00000439552 670 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A5P29400 snoU13.4-201ENST00000458916 104 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 snoU13.3-201ENST00000459441 104 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A5P29400 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A5P29400 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A5P29400 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A5P29400 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A5P29400 SNORA31.24-201ENST00000517232 57 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 AP001804.3-201ENST00000525146 880 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 OR10V3P-201ENST00000525712 725 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 AC008015.1-201ENST00000555505 465 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 U6.107-201ENST00000637108 79 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
COL4A5P29400 ZNF209P-201ENST00000593450 2304 ntBASIC1.82□□□□□ -2.12
COL4A5P29400 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A5P29400 ZNF734P-201ENST00000419494 1534 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL4A5P29400 AC121333.1-201ENST00000567488 2709 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A5P29400 RNU4-78P-201ENST00000410940 126 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 HMGB3P2-201ENST00000411913 584 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 RABEPKP1-201ENST00000440529 1026 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A5P29400 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.81□□□□□ -2.12
COL4A5P29400 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A5P29400 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 AC034244.1-201ENST00000507687 207 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A5P29400 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL4A5P29400 RNU1-92P-201ENST00000517017 135 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A5P29400 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.81□□□□□ -2.12
COL4A5P29400 AL353770.2-201ENST00000620024 78 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 DUXAP9-208ENST00000622815 614 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 MIR6767-201ENST00000637302 66 ntBASIC1.81□□□□□ -2.12
COL4A5P29400 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A5P29400 DDX10P1-201ENST00000448545 1933 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AP002907.1-201ENST00000606361 1430 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 MIR517C-201ENST00000385103 95 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 RPL23AP29-201ENST00000397284 453 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 MTATP6P4-201ENST00000427725 675 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A5P29400 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms