Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RN7SKP266-201ENST00000410232 287 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN4P29074 AC010099.3-201ENST00000423896 409 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AL035407.1-201ENST00000429211 571 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC236972.1-201ENST00000433225 199 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 MTND1P31-201ENST00000449206 961 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 RPL23AP35-201ENST00000451906 501 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 RNU6-420P-201ENST00000458780 107 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 HSPE1P6-201ENST00000479457 291 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 MTCYBP35-201ENST00000503630 1137 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC147055.4-201ENST00000504399 745 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PTPN4P29074 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.95□□□□□ -1.94
PTPN4P29074 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.95□□□□□ -1.94
PTPN4P29074 AC068587.4-201ENST00000533893 186 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 LRRC34P1-201ENST00000542742 915 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN4P29074 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 U73023.1-201ENST00000603134 700 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AL031281.1-201ENST00000604049 488 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AL133507.1-201ENST00000605269 557 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN4P29074 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN4P29074 AL136981.2-201ENST00000617319 734 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC068880.5-201ENST00000624331 290 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AL137790.1-201ENST00000634283 177 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN4P29074 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 DDX10P1-201ENST00000448545 1933 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 GABRG2-229ENST00000641017 3628 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 RNU6-744P-201ENST00000365557 107 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 RNU6-1316P-201ENST00000384242 108 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 RN7SKP220-201ENST00000410611 288 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.94□□□□□ -1.94
PTPN4P29074 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 RPL26P6-201ENST00000440913 438 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC009237.8-201ENST00000445492 379 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 EEF1E1P1-201ENST00000446998 430 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.94□□□□□ -1.94
PTPN4P29074 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC009901.1-201ENST00000506703 541 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC009812.2-201ENST00000517657 457 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 UBTFL10-201ENST00000528532 562 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN4P29074 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC009094.1-201ENST00000564443 426 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 ACTR3BP3-201ENST00000565577 979 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 MIR4513-201ENST00000581077 86 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 PRELID3BP8-201ENST00000604148 295 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN4P29074 MIR7106-201ENST00000612419 65 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN4P29074 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AL355493.4-201ENST00000618530 292 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC002064.3-201ENST00000623448 346 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 AC007490.1-201ENST00000624321 703 ntBASIC2.94□□□□□ -1.94
PTPN4P29074 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN4P29074 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTPN4P29074 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPN4P29074 AC000403.1-201ENST00000613696 3585 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPN4P29074 AC138915.1-201ENST00000565427 1685 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTPN4P29074 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PTPN4P29074 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PTPN4P29074 RNU1-105P-201ENST00000363470 161 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 U3.20-201ENST00000390909 217 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 RNA5SP354-201ENST00000391247 136 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 MTCO1P17-201ENST00000411522 491 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AL645937.1-202ENST00000421799 937 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 NDUFB4P7-201ENST00000423198 363 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 PPP1R11P2-201ENST00000423543 382 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN4P29074 AC107083.1-201ENST00000439643 279 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms