Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR93-201ENST00000385024 80 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 CISD1P1-201ENST00000393907 327 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 RNU6-1077P-201ENST00000410506 102 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RNA5SP38-201ENST00000410750 119 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RNA5SP111-201ENST00000411386 101 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 OR6C66P-201ENST00000414917 930 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RPL7P46-201ENST00000425129 740 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 SNRPEP9-201ENST00000436794 238 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AL451050.1-201ENST00000450126 415 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC003071.1-201ENST00000451219 789 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AL162395.1-201ENST00000457882 422 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RPL21P8-201ENST00000465083 535 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC012181.1-201ENST00000479895 423 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC146944.2-203ENST00000502493 354 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC011352.1-201ENST00000512300 793 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC139495.1-202ENST00000513164 354 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RNU6-1281P-201ENST00000516223 105 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 RN7SKP219-201ENST00000516825 296 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AK6P1-201ENST00000540219 478 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF4P23510 MTATP6P3-201ENST00000581686 676 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC107304.1-201ENST00000604229 296 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AL160290.3-201ENST00000604869 165 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AL670379.4-201ENST00000605279 254 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 FTX_3.1-201ENST00000610451 147 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 PLCE1P1-201ENST00000622094 305 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC005086.4-201ENST00000623065 213 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.7□□□□□ -1.82
TNFSF4P23510 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF4P23510 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC005183.1-201ENST00000603687 1979 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
TNFSF4P23510 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF4P23510 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF4P23510 AL139276.1-201ENST00000311910 1001 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RNY4P14-201ENST00000363656 96 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RHOT1P2-201ENST00000366423 333 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF4P23510 RNU4-25P-201ENST00000410569 230 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RNU2-68P-201ENST00000410878 191 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 USP9YP6-201ENST00000413550 854 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TNFSF4P23510 USP9YP27-201ENST00000418455 438 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC068533.1-201ENST00000418542 415 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RPL17P36-201ENST00000420302 549 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RPL36AP53-201ENST00000432891 316 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 RPL23AP46-201ENST00000438548 490 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC104058.1-201ENST00000448028 297 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 TPT1P12-201ENST00000448968 492 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC073415.1-201ENST00000449240 153 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF4P23510 CECR9-201ENST00000453421 199 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 RPL35AP15-201ENST00000468042 339 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RPS26P28-201ENST00000470806 348 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC233702.1-201ENST00000482905 502 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 EIF4EP3-201ENST00000498782 656 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AL592156.1-201ENST00000508758 304 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 SNORA31.1-201ENST00000515993 133 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 SNORA31.5-201ENST00000516190 133 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 Y_RNA.704-201ENST00000516851 102 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 RNU6-1315P-201ENST00000517187 99 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 MTND4LP26-201ENST00000518144 282 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC069240.1-201ENST00000548774 375 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.69□□□□□ -1.82
TNFSF4P23510 RPL23AP97-201ENST00000568955 471 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC010201.1-201ENST00000605051 540 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC004805.2-201ENST00000605382 482 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF4P23510 MIR6891-201ENST00000618788 93 ntBASIC3.69□□□□□ -1.82
TNFSF4P23510 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFSF4P23510 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFSF4P23510 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF4P23510 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF4P23510 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms