Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-658P-201ENST00000384606 106 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RNU6-306P-201ENST00000384617 107 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RNU6-310P-201ENST00000384655 107 ntBASIC4.41□□□□□ -1.7
ATF4P18848 MIR517A-201ENST00000385001 87 ntBASIC4.41□□□□□ -1.7
ATF4P18848 MIR888-201ENST00000401186 77 ntBASIC4.41□□□□□ -1.7
ATF4P18848 Y_RNA.594-201ENST00000410373 140 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RNA5SP178-201ENST00000410380 128 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC009237.10-201ENST00000414112 510 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.41□□□□□ -1.7
ATF4P18848 AC093151.1-201ENST00000427711 313 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC236972.1-201ENST00000433225 199 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.41□□□□□ -1.7
ATF4P18848 AC007389.2-201ENST00000434630 306 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.41□□□□□ -1.7
ATF4P18848 GAPDHP58-201ENST00000438477 1006 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RPS12P17-201ENST00000438591 377 ntBASIC4.41□□□□□ -1.7
ATF4P18848 BTF3P6-201ENST00000448054 499 ntBASIC4.41□□□□□ -1.7
ATF4P18848 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC023141.9-201ENST00000458734 412 ntBASIC4.41□□□□□ -1.7
ATF4P18848 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AL122020.1-201ENST00000472287 459 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC007998.1-201ENST00000474156 672 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RPL32P33-201ENST00000487023 394 ntBASIC4.41□□□□□ -1.7
ATF4P18848 HIGD1AP14-201ENST00000507617 282 ntBASIC4.41□□□□□ -1.7
ATF4P18848 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.41□□□□□ -1.7
ATF4P18848 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.41□□□□□ -1.7
ATF4P18848 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.41□□□□□ -1.7
ATF4P18848 RNU6-703P-201ENST00000516946 107 ntBASIC4.41□□□□□ -1.7
ATF4P18848 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.41□□□□□ -1.7
ATF4P18848 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.41□□□□□ -1.7
ATF4P18848 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.41□□□□□ -1.7
ATF4P18848 SYF2P1-201ENST00000550658 413 ntBASIC4.41□□□□□ -1.7
ATF4P18848 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.41□□□□□ -1.7
ATF4P18848 MIR4260-201ENST00000583107 67 ntBASIC4.41□□□□□ -1.7
ATF4P18848 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.41□□□□□ -1.7
ATF4P18848 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.41□□□□□ -1.7
ATF4P18848 RNF138P2-201ENST00000603490 592 ntBASIC4.41□□□□□ -1.7
ATF4P18848 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
ATF4P18848 AL591516.1-201ENST00000611326 274 ntBASIC4.41□□□□□ -1.7
ATF4P18848 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.41□□□□□ -1.7
ATF4P18848 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.41□□□□□ -1.7
ATF4P18848 AC002546.1-201ENST00000588041 2504 ntBASIC4.41□□□□□ -1.7
ATF4P18848 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.7
ATF4P18848 MTND5P19-201ENST00000424872 1794 ntBASIC4.4□□□□□ -1.7
ATF4P18848 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATF4P18848 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
ATF4P18848 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATF4P18848 AC068254.2-201ENST00000623938 3577 ntBASIC4.4□□□□□ -1.7
ATF4P18848 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.7
ATF4P18848 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATF4P18848 RN7SKP104-201ENST00000362605 328 ntBASIC4.4□□□□□ -1.71
ATF4P18848 Y_RNA.151-201ENST00000363566 112 ntBASIC4.4□□□□□ -1.71
ATF4P18848 RNA5SP132-201ENST00000364725 118 ntBASIC4.4□□□□□ -1.71
ATF4P18848 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.4□□□□□ -1.71
ATF4P18848 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATF4P18848 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATF4P18848 RPL21P17-201ENST00000397467 475 ntBASIC4.4□□□□□ -1.71
ATF4P18848 RPS4XP3-201ENST00000398541 413 ntBASIC4.4□□□□□ -1.71
ATF4P18848 RPL5P18-201ENST00000406671 891 ntBASIC4.4□□□□□ -1.71
ATF4P18848 Y_RNA.646-201ENST00000410980 101 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AL030996.1-201ENST00000411430 235 ntBASIC4.4□□□□□ -1.71
ATF4P18848 SNORD56-201ENST00000413522 71 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATF4P18848 RPS3P2-201ENST00000421346 701 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.4□□□□□ -1.71
ATF4P18848 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.4□□□□□ -1.71
ATF4P18848 SNRPEP4-201ENST00000435815 279 ntBASIC4.4□□□□□ -1.71
ATF4P18848 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.4□□□□□ -1.71
ATF4P18848 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.4□□□□□ -1.71
ATF4P18848 MTCO3P10-201ENST00000455912 772 ntBASIC4.4□□□□□ -1.71
ATF4P18848 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 RPS3AP41-201ENST00000462701 778 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC010469.1-201ENST00000463864 576 ntBASIC4.4□□□□□ -1.71
ATF4P18848 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 Y_RNA.670-201ENST00000516255 105 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 LINC00933-203ENST00000559812 219 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC020661.2-201ENST00000560114 134 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 MIR3614-201ENST00000581261 86 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC013244.1-201ENST00000604279 193 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.4□□□□□ -1.71
ATF4P18848 MIR6768-201ENST00000610734 72 ntBASIC4.4□□□□□ -1.71
ATF4P18848 PART1_1.1-201ENST00000611761 217 ntBASIC4.4□□□□□ -1.71
ATF4P18848 MIR6076-201ENST00000617521 113 ntBASIC4.4□□□□□ -1.71
ATF4P18848 AC127024.6-201ENST00000621598 424 ntBASIC4.4□□□□□ -1.71
ATF4P18848 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.4□□□□□ -1.71
ATF4P18848 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.4□□□□□ -1.71
ATF4P18848 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.4□□□□□ -1.71
ATF4P18848 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATF4P18848 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.71
ATF4P18848 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.4□□□□□ -1.71
ATF4P18848 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATF4P18848 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms