Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC121334.2-201ENST00000605387 271 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 AL355472.4-201ENST00000610233 626 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 AL122125.1-201ENST00000616999 600 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 SNORD39.4-201ENST00000620099 78 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 C2orf27A-204ENST00000623058 969 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.14□□□□□ -1.75
COL11A2P13942 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL11A2P13942 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL11A2P13942 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
COL11A2P13942 AC008079.2-201ENST00000623543 20396 ntBASIC4.14□□□□□ -1.75
COL11A2P13942 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL11A2P13942 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 RNU6-359P-201ENST00000365466 108 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 RNU6-74P-201ENST00000384235 107 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 RNU6-225P-201ENST00000384613 103 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 RNA5SP39-201ENST00000411245 120 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC127526.1-201ENST00000417526 366 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AL353678.1-201ENST00000422735 741 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 USP9YP15-201ENST00000442391 422 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 RNU6-329P-201ENST00000459618 107 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 AC114797.1-201ENST00000514003 728 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.13□□□□□ -1.75
COL11A2P13942 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 SULT1C2P2-201ENST00000562517 294 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC055876.1-202ENST00000567053 138 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.13□□□□□ -1.75
COL11A2P13942 MIR3118-1-201ENST00000581787 76 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC007687.1-201ENST00000602704 304 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.13□□□□□ -1.75
COL11A2P13942 BMS1P21-201ENST00000634565 365 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AC138649.5-201ENST00000637456 137 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 MTND5P42-201ENST00000637720 498 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 AL732372.2-225ENST00000642124 456 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.13□□□□□ -1.75
COL11A2P13942 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 FAM35BP-202ENST00000497389 3337 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.13□□□□□ -1.75
COL11A2P13942 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.13□□□□□ -1.75
COL11A2P13942 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A2P13942 MTND4P35-201ENST00000604257 1375 ntBASIC4.13□□□□□ -1.75
COL11A2P13942 SNORA51.6-201ENST00000384151 125 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 RNU6-1160P-201ENST00000384546 104 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC068050.1-201ENST00000394891 380 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 MTND3P8-201ENST00000412909 339 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 AC022022.1-201ENST00000430304 178 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.12□□□□□ -1.75
COL11A2P13942 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.12□□□□□ -1.75
COL11A2P13942 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 HMGB3P22-202ENST00000451823 572 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 RPS29P26-201ENST00000477483 171 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 RN7SKP96-201ENST00000516948 297 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC090572.1-201ENST00000519251 160 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC022861.1-201ENST00000522981 663 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 AC116158.1-201ENST00000560231 2129 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 AC093249.1-201ENST00000567049 203 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 BBIP1P1-201ENST00000602999 279 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 Z84480.1-201ENST00000605131 311 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 BX664608.1-201ENST00000610519 487 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC008121.3-201ENST00000618726 433 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AC090971.5-201ENST00000621102 293 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A2P13942 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A2P13942 AC022031.1-201ENST00000585985 2593 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A2P13942 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
COL11A2P13942 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL11A2P13942 BTBD10P1-201ENST00000549824 1352 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A2P13942 Y_RNA.132-201ENST00000363421 102 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 RNU4-1-201ENST00000363925 141 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 RNU6-1158P-201ENST00000391167 107 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AL354719.1-201ENST00000406535 843 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 RPL23AP82-202ENST00000427528 469 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A2P13942 RPL36AP53-201ENST00000432891 316 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 FAM103A2P-201ENST00000444122 354 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 CENPBD1P1-201ENST00000464061 469 ntBASIC4.12□□□□□ -1.75
COL11A2P13942 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A2P13942 AC091826.1-201ENST00000514065 313 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms