Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC080078.3-201ENST00000605407 463 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A1P02462 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A1P02462 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 STMN1P1-201ENST00000617809 440 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A1P02462 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A1P02462 MIR4496-201ENST00000635896 61 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MFSD8-213ENST00000641134 1327 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
COL4A1P02462 AC090740.1-201ENST00000623193 2262 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 RNU6-77P-201ENST00000410554 91 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A1P02462 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 LSM1P1-201ENST00000438629 273 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.76□□□□□ -2.13
COL4A1P02462 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A1P02462 AC104108.1-201ENST00000509930 412 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A1P02462 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 RN7SKP277-201ENST00000516895 283 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 RNU6-711P-201ENST00000517255 106 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AC025755.1-201ENST00000521306 278 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A1P02462 OSBPL9P3-201ENST00000534523 595 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AC104229.1-201ENST00000561364 255 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A1P02462 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.76□□□□□ -2.13
COL4A1P02462 AC009220.3-201ENST00000604318 586 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A1P02462 AP006248.3-201ENST00000623580 594 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A1P02462 AC011477.1-204ENST00000623416 1325 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 AP002907.1-201ENST00000606361 1430 ntBASIC1.76□□□□□ -2.13
COL4A1P02462 MAPK10-266ENST00000641066 6555 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC103710.2-202ENST00000641454 2853 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 ENSAP3-201ENST00000312710 333 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 Y_RNA.191-201ENST00000363972 113 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 SNORD56.5-201ENST00000364281 72 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 MIR1304-201ENST00000408243 91 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 RNU2-21P-201ENST00000410368 188 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A1P02462 AC004865.1-201ENST00000442276 1003 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A1P02462 HMGN2P16-201ENST00000456802 261 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC080013.2-201ENST00000460866 323 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC108729.2-201ENST00000476543 840 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 RPL21P47-201ENST00000483696 477 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A1P02462 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A1P02462 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A1P02462 AC124293.1-201ENST00000530034 493 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A1P02462 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
COL4A1P02462 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A1P02462 AC008015.1-201ENST00000555505 465 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC012254.4-201ENST00000588843 273 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AL109653.1-201ENST00000603091 248 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC113194.1-201ENST00000606037 500 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 RMST_10.1-201ENST00000616309 154 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AL445493.3-201ENST00000619568 477 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AP003400.6-201ENST00000624698 740 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 AC091948.2-201ENST00000636510 279 ntBASIC1.75□□□□□ -2.13
COL4A1P02462 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A1P02462 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A1P02462 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
COL4A1P02462 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A1P02462 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 MTCO1P18-201ENST00000455518 1419 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 RNU6-796P-201ENST00000391086 107 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 SSXP9-201ENST00000417503 292 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 YWHAZP8-201ENST00000436935 731 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 FABP5P3-201ENST00000437960 408 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 RNFT1P2-201ENST00000443064 757 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 RPS26P56-201ENST00000444468 240 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 RPL37P6-202ENST00000464216 403 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A1P02462 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC034244.1-201ENST00000507687 207 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC008885.2-201ENST00000509506 930 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 MTCO3P44-201ENST00000510977 541 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 MTND2P26-201ENST00000528255 1029 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
COL4A1P02462 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 HSPE1P14-201ENST00000605812 302 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms