Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-780P-201ENST00000391030 104 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RNU6-482P-201ENST00000391068 107 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RPS3AP36-201ENST00000398190 775 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 MTCO1P17-201ENST00000411522 491 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC138393.2-201ENST00000414742 246 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AL451074.5-201ENST00000415894 435 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC073136.2-201ENST00000417282 849 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC009237.2-201ENST00000421358 284 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.21□□□□□ -1.9
COL2A1P02458 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 ISCA1P1-201ENST00000426679 387 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 VDAC1P3-201ENST00000434069 851 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RPS29P6-201ENST00000438196 145 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 AL022238.1-201ENST00000442557 355 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 GDI2P2-201ENST00000445131 608 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.21□□□□□ -1.9
COL2A1P02458 RPL23AP31-201ENST00000456160 467 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.21□□□□□ -1.9
COL2A1P02458 PNPLA4P1-201ENST00000458328 305 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RPS3AP17-201ENST00000472594 777 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC091951.2-201ENST00000500762 203 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC046134.1-201ENST00000514454 666 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.21□□□□□ -1.9
COL2A1P02458 OR5AK1P-201ENST00000524837 922 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.21□□□□□ -1.9
COL2A1P02458 DEFB122-202ENST00000569013 197 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC090616.5-202ENST00000582111 297 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 FAM106CP-201ENST00000582212 507 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.21□□□□□ -1.9
COL2A1P02458 MIR7844-201ENST00000616161 122 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC126177.8-201ENST00000618339 1015 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC006338.1-201ENST00000618453 749 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC092628.2-201ENST00000622492 339 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RPL23AP61-201ENST00000623642 466 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 CR381653.2-201ENST00000624041 768 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC241585.2-209ENST00000638217 143 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL2A1P02458 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL2A1P02458 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL2A1P02458 MTCO1P23-201ENST00000415223 1526 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL2A1P02458 AC016716.1-201ENST00000265882 708 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 RNU6-1090P-201ENST00000364065 94 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 RNU6-1263P-201ENST00000384601 106 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 RNU6-297P-201ENST00000384636 107 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 RNU6-1011P-201ENST00000384668 107 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL2A1P02458 AL356057.3-201ENST00000402607 340 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AL590002.1-201ENST00000406554 418 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.2□□□□□ -1.9
COL2A1P02458 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.2□□□□□ -1.9
COL2A1P02458 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AL365184.2-201ENST00000431139 435 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 USP9YP8-201ENST00000441913 500 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.2□□□□□ -1.9
COL2A1P02458 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 VN1R10P-201ENST00000447106 875 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 RPL7P31-201ENST00000450192 724 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 HSPE1P22-201ENST00000456856 327 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 RPL21P41-201ENST00000459863 264 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 KLF3P2-201ENST00000465138 268 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 AC011352.3-201ENST00000505162 593 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
COL2A1P02458 AP002748.2-201ENST00000528671 348 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.2□□□□□ -1.9
COL2A1P02458 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.2□□□□□ -1.9
COL2A1P02458 ZNF861P-201ENST00000588126 639 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC009220.3-201ENST00000604318 586 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AL139286.1-201ENST00000604465 483 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC008277.2-201ENST00000605196 797 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC008945.2-201ENST00000606056 604 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC024560.3-201ENST00000608482 349 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC091834.1-201ENST00000614543 472 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.2□□□□□ -1.9
COL2A1P02458 Z99496.1-201ENST00000469424 1477 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 AC134882.1-201ENST00000603738 1676 ntBASIC3.2□□□□□ -1.9
COL2A1P02458 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL2A1P02458 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 AL450326.2-201ENST00000421913 1962 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms