Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
LDLRP01130 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
LDLRP01130 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 MTND5P26-201ENST00000426018 1752 ntBASIC3.43□□□□□ -1.86
LDLRP01130 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
LDLRP01130 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LDLRP01130 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LDLRP01130 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LDLRP01130 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.43□□□□□ -1.86
LDLRP01130 RPS3AP24-201ENST00000407896 734 ntBASIC3.43□□□□□ -1.86
LDLRP01130 RNU2-71P-201ENST00000411395 189 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AL137014.1-201ENST00000420490 1226 ntBASIC3.43□□□□□ -1.86
LDLRP01130 RPS15AP6-201ENST00000420703 385 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 MTND4P28-201ENST00000426217 387 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AL356583.2-201ENST00000426536 280 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC079780.1-201ENST00000428259 207 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.43□□□□□ -1.86
LDLRP01130 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 WASF1P1-201ENST00000447560 1131 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AL590365.1-201ENST00000450788 243 ntBASIC3.43□□□□□ -1.86
LDLRP01130 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.43□□□□□ -1.86
LDLRP01130 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 RPL23AP94-201ENST00000512518 302 ntBASIC3.43□□□□□ -1.86
LDLRP01130 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 RNU6-506P-201ENST00000516553 94 ntBASIC3.43□□□□□ -1.86
LDLRP01130 RNU6-528P-201ENST00000516926 100 ntBASIC3.43□□□□□ -1.86
LDLRP01130 RN7SKP289-201ENST00000517244 295 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC022695.1-201ENST00000522089 237 ntBASIC3.43□□□□□ -1.86
LDLRP01130 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 AC118273.2-201ENST00000532092 465 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
LDLRP01130 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.43□□□□□ -1.86
LDLRP01130 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.43□□□□□ -1.86
LDLRP01130 TUG1_1.1-201ENST00000610654 145 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC025253.1-201ENST00000613623 543 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC007014.2-201ENST00000615581 479 ntBASIC3.43□□□□□ -1.86
LDLRP01130 U4.5-201ENST00000617137 123 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC092794.2-201ENST00000620933 563 ntBASIC3.43□□□□□ -1.86
LDLRP01130 AC002550.2-201ENST00000621246 394 ntBASIC3.43□□□□□ -1.86
LDLRP01130 OR5H6-203ENST00000642105 978 ntBASIC3.43□□□□□ -1.86
LDLRP01130 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
LDLRP01130 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDLRP01130 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 AC116096.1-201ENST00000566804 2314 ntBASIC3.42□□□□□ -1.86
LDLRP01130 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
LDLRP01130 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LDLRP01130 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
LDLRP01130 RNU6-359P-201ENST00000365466 108 ntBASIC3.42□□□□□ -1.86
LDLRP01130 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
LDLRP01130 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LDLRP01130 RNU6-1074P-201ENST00000383995 104 ntBASIC3.42□□□□□ -1.86
LDLRP01130 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LDLRP01130 U3.20-201ENST00000390909 217 ntBASIC3.42□□□□□ -1.86
LDLRP01130 CCNG1P1-201ENST00000406783 885 ntBASIC3.42□□□□□ -1.86
LDLRP01130 MTCO3P12-201ENST00000416718 547 ntBASIC3.42□□□□□ -1.86
LDLRP01130 CCDC58P2-201ENST00000417131 366 ntBASIC3.42□□□□□ -1.86
LDLRP01130 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
LDLRP01130 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.42□□□□□ -1.86
LDLRP01130 USP9YP18-201ENST00000425912 695 ntBASIC3.42□□□□□ -1.86
LDLRP01130 OR4K11P-201ENST00000431829 904 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AC236972.1-201ENST00000433225 199 ntBASIC3.42□□□□□ -1.86
LDLRP01130 UBE2V1P13-201ENST00000436983 439 ntBASIC3.42□□□□□ -1.86
LDLRP01130 RPL22P17-201ENST00000438729 315 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AC108734.1-201ENST00000439549 399 ntBASIC3.42□□□□□ -1.86
LDLRP01130 UBE2V1P7-201ENST00000446395 340 ntBASIC3.42□□□□□ -1.86
LDLRP01130 RPS3AP46-201ENST00000448352 682 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.42□□□□□ -1.86
LDLRP01130 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.42□□□□□ -1.86
LDLRP01130 SNORD121B-201ENST00000458838 81 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AL121769.1-201ENST00000469473 401 ntBASIC3.42□□□□□ -1.86
LDLRP01130 PRDX4P1-201ENST00000507189 574 ntBASIC3.42□□□□□ -1.86
LDLRP01130 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.42□□□□□ -1.86
LDLRP01130 AC090136.1-201ENST00000520009 240 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.42□□□□□ -1.86
LDLRP01130 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.42□□□□□ -1.86
LDLRP01130 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.42□□□□□ -1.86
LDLRP01130 AL121579.1-201ENST00000555129 305 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms