Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 RNU6-102P-201ENST00000384485 104 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AL590704.1-201ENST00000402856 794 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 TMEM167AP1-201ENST00000423409 219 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 FTLP19-201ENST00000433300 394 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 PRDX3P3-201ENST00000447765 522 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 RPL21P129-201ENST00000491732 478 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 TRAV32-201ENST00000553993 340 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ALDH1A1P00352 A2MP1-204ENST00000566278 4130 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 AC097063.1-201ENST00000426714 1797 ntBASIC5.8□□□□□ -1.48
ALDH1A1P00352 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ALDH1A1P00352 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 SNORD113-8-201ENST00000363497 74 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 RNU1-130P-201ENST00000363930 160 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 RNU6-1243P-201ENST00000364028 107 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 U3.10-201ENST00000364459 214 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 U3.13-201ENST00000364804 214 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 Y_RNA.497-201ENST00000384447 98 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 MIR23B-201ENST00000384832 97 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 U3.29-201ENST00000391296 212 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 RPL23AP36-201ENST00000413895 458 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC010733.1-201ENST00000451515 401 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC083899.1-201ENST00000454465 3819 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC008481.1-201ENST00000463278 396 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC010631.1-201ENST00000474150 156 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC098826.3-201ENST00000603823 466 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 AC133552.1-201ENST00000569988 4007 ntBASIC5.79□□□□□ -1.48
ALDH1A1P00352 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ALDH1A1P00352 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
ALDH1A1P00352 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 AP000756.2-201ENST00000624168 2567 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 RNU6-153P-201ENST00000364422 104 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 RNU6-290P-201ENST00000365212 101 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 Y_RNA.353-201ENST00000365440 108 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 RNU6-1035P-201ENST00000384477 107 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 MTCYBP2-201ENST00000407745 171 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 AL035461.1-201ENST00000421490 332 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 RPL37P6-201ENST00000460682 294 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 RPL21P6-201ENST00000479171 504 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 SNORA70.11-201ENST00000515987 138 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 SNORA70.13-201ENST00000516116 138 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 AC087369.1-201ENST00000520775 996 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 AC027288.2-201ENST00000553028 243 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 AP005432.2-201ENST00000608162 586 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 AL139124.1-201ENST00000609123 421 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ALDH1A1P00352 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms