Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 snoU109.4-201ENST00000458953 143 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AL358832.1-201ENST00000497800 389 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU2-46P-201ENST00000517038 113 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU6-430P-201ENST00000517078 107 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU6-201P-201ENST00000517100 61 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AP000907.2-201ENST00000530827 353 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC016957.1-201ENST00000534895 309 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 CKS1BP3-201ENST00000600888 237 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC055876.5-201ENST00000605667 259 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU1-30P-201ENST00000606575 163 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.19□□□□□ -1.9
CLPTM1O96005 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLPTM1O96005 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLPTM1O96005 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLPTM1O96005 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLPTM1O96005 MTND5P26-201ENST00000426018 1752 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 FRG1BP-201ENST00000278882 761 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLPTM1O96005 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RN7SKP226-201ENST00000364912 300 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLPTM1O96005 RNU6-259P-201ENST00000383999 107 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 Y_RNA.582-201ENST00000391023 95 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 BX295541.1-201ENST00000417774 250 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL358934.1-201ENST00000432346 324 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC009961.2-201ENST00000435771 251 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AL133547.1-201ENST00000448546 220 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RPS24P6-201ENST00000452670 400 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.18□□□□□ -1.9
CLPTM1O96005 SNORD121B-201ENST00000458838 81 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC023598.1-201ENST00000472521 361 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 ST13P14-201ENST00000474095 734 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RPL9P33-201ENST00000484311 566 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.18□□□□□ -1.9
CLPTM1O96005 HMGB1P22-201ENST00000505315 124 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.18□□□□□ -1.9
CLPTM1O96005 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.18□□□□□ -1.9
CLPTM1O96005 Y_RNA.672-201ENST00000516289 104 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RNU1-95P-201ENST00000516357 160 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 SNORA67.7-201ENST00000516664 135 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RNU1-128P-201ENST00000516704 160 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 RNU6-528P-201ENST00000516926 100 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
CLPTM1O96005 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 CR383656.7-201ENST00000548164 174 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC055876.1-202ENST00000567053 138 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL356432.3-201ENST00000568952 465 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.18□□□□□ -1.9
CLPTM1O96005 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL161729.4-201ENST00000604650 476 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC091304.9-201ENST00000612091 226 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC068831.7-201ENST00000616954 363 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC006133.1-201ENST00000617106 264 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC095031.1-201ENST00000623685 672 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC112204.3-201ENST00000623822 332 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC034229.5-201ENST00000624258 185 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC012442.3-202ENST00000636742 206 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 AC011460.1-201ENST00000636268 1834 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLPTM1O96005 AC009902.3-201ENST00000606235 2172 ntBASIC3.18□□□□□ -1.9
CLPTM1O96005 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.18□□□□□ -1.9
CLPTM1O96005 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLPTM1O96005 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLPTM1O96005 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC010733.2-201ENST00000589496 5702 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms