Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL592310.1-201ENST00000414330 671 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AL096701.2-201ENST00000416920 238 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC005005.2-201ENST00000420779 380 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 MYL8P-204ENST00000431574 518 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 USP9YP24-201ENST00000434374 697 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 USP9YP17-201ENST00000444617 696 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 VN1R10P-201ENST00000447106 875 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 TRGVB-201ENST00000453257 471 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 USP9YP25-201ENST00000457708 443 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC092757.1-201ENST00000467293 467 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC021146.8-201ENST00000507455 733 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC126177.3-201ENST00000551839 688 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 LRRC37A5P-203ENST00000580181 585 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC105148.1-201ENST00000604961 409 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC006329.2-201ENST00000611491 394 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC005332.6-201ENST00000613178 446 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 SCARNA15.3-201ENST00000626315 122 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 SCARNA4.1-201ENST00000628597 123 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
CTDNEP1O95476 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTDNEP1O95476 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTDNEP1O95476 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 NACA3P-201ENST00000359690 648 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 Y_RNA.25-201ENST00000362528 102 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 SNORD82-201ENST00000365530 70 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 U3.29-201ENST00000391296 212 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL590084.1-201ENST00000407885 387 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL513477.1-202ENST00000417061 214 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 MTCO2P20-201ENST00000437339 673 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC093767.1-201ENST00000504523 156 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 RNY4P37-201ENST00000516225 96 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CTDNEP1O95476 SNRPGP18-201ENST00000553000 214 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC069304.2-201ENST00000605154 435 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC092106.3-201ENST00000611308 722 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 AC011460.1-201ENST00000636268 1834 ntBASIC2.49□□□□□ -2.01
CTDNEP1O95476 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 CKAP2P1-201ENST00000555477 2049 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 RNU4-92P-201ENST00000363783 136 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 RNU6-560P-201ENST00000364007 108 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 MIR506-201ENST00000384998 124 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 MIR513B-201ENST00000385136 84 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 SNRPEP2-201ENST00000397592 279 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 CYCSP45-201ENST00000402289 315 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AL356057.2-201ENST00000403318 432 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 RNU2-25P-201ENST00000411041 191 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 ELOCP9-201ENST00000418624 239 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AL137014.1-201ENST00000420490 1226 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 USP9YP11-201ENST00000427537 717 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 Z80107.1-201ENST00000436830 412 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC007327.1-201ENST00000447461 264 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 MTND2P19-201ENST00000449129 1012 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC009961.3-201ENST00000449832 765 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC234775.1-201ENST00000454247 670 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 KLRA1P-201ENST00000503499 986 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC020699.1-201ENST00000505161 445 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 HMGB1P28-201ENST00000507778 552 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC010460.2-201ENST00000509054 677 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTDNEP1O95476 HIGD1AP17-201ENST00000554576 276 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC009163.5-201ENST00000575421 637 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTDNEP1O95476 GLUD1P4-201ENST00000590914 418 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 BNIP3P26-201ENST00000600827 554 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 DUXAP3-201ENST00000603616 594 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.48□□□□□ -2.01
CTDNEP1O95476 AC106028.5-201ENST00000610332 395 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 CU459211.1-201ENST00000635667 749 ntBASIC2.48□□□□□ -2.01
CTDNEP1O95476 U6.101-201ENST00000637707 76 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms