Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAPGEF3O95398 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAPGEF3O95398 MFSD8-233ENST00000641482 4860 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC011266.1-201ENST00000624119 3569 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 Y_RNA.402-201ENST00000383972 102 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 Y_RNA.493-201ENST00000384422 102 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 Y_RNA.573-201ENST00000384763 105 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 MIR124-3-201ENST00000384866 87 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC019097.1-201ENST00000424783 735 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 WASF1P1-201ENST00000447560 1131 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC084357.1-201ENST00000473404 255 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 FCF1P3-201ENST00000496394 590 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AP003072.2-201ENST00000527756 676 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AL157687.1-201ENST00000554853 619 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC006557.5-201ENST00000603126 811 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC012507.3-201ENST00000603556 477 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 AC008277.2-201ENST00000605196 797 ntBASIC5.05□□□□□ -1.6
RAPGEF3O95398 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RAPGEF3O95398 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAPGEF3O95398 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAPGEF3O95398 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 Y_RNA.88-201ENST00000363029 99 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 RNU4-1-201ENST00000363925 141 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 RNY1P12-201ENST00000364251 105 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 Y_RNA.256-201ENST00000364594 104 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 SNORA20.2-201ENST00000383922 131 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 Y_RNA.481-201ENST00000384373 102 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 RNU6-114P-201ENST00000384704 105 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 MTCO2P19-201ENST00000427513 598 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC093156.1-201ENST00000440382 670 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 PSMA2P1-201ENST00000526365 646 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 OR4P1P-201ENST00000530808 1136 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AP002404.1-201ENST00000532005 451 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 MIR3167-201ENST00000579623 85 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC104763.2-201ENST00000604179 382 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AL391813.2-201ENST00000609113 322 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AL355073.2-201ENST00000612106 557 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 uc_338.12-201ENST00000616344 181 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 U73479.1-201ENST00000618062 168 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AC018692.3-201ENST00000623929 123 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 AL159972.1-201ENST00000625150 448 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 LRRC77P-213ENST00000637727 880 ntBASIC5.04□□□□□ -1.6
RAPGEF3O95398 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.04□□□□□ -1.6
RAPGEF3O95398 AL138713.1-201ENST00000624026 2130 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 NMD3P1-201ENST00000439704 1488 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAPGEF3O95398 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 RNU6-989P-201ENST00000362756 107 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 RNU6-1085P-201ENST00000363576 107 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 RNA5SP42-201ENST00000364278 115 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 Y_RNA.453-201ENST00000384223 109 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 MTCO3P18-201ENST00000440206 761 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 RPL23AP20-201ENST00000447965 421 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 HMGB1P25-201ENST00000468402 607 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 AC079382.1-201ENST00000493346 557 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 AC118273.2-201ENST00000532092 465 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 GTF3AP2-201ENST00000557014 266 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 BDH2P1-201ENST00000602288 736 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RAPGEF3O95398 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAPGEF3O95398 PNPT1P2-201ENST00000456768 2050 ntBASIC5.03□□□□□ -1.6
RAPGEF3O95398 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAPGEF3O95398 AL356489.2-201ENST00000566968 3528 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAPGEF3O95398 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 RNU5A-8P-201ENST00000364102 114 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 RPS12P23-201ENST00000419579 400 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms