Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SNHG22-203ENST00000617833 660 ntBASIC4.02□□□□□ -1.77
VPS4BO75351 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4BO75351 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4BO75351 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4BO75351 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4BO75351 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS4BO75351 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS4BO75351 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS4BO75351 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS4BO75351 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
VPS4BO75351 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
VPS4BO75351 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4BO75351 Y_RNA.86-201ENST00000363020 111 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VPS4BO75351 RNU6-1009P-201ENST00000390996 107 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4BO75351 AL359634.1-202ENST00000404721 284 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 RPL21P24-201ENST00000413752 448 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4BO75351 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4BO75351 PPP1R11P2-201ENST00000423543 382 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AL513185.2-201ENST00000425543 193 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS4BO75351 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC114786.4-201ENST00000508771 728 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AC010486.1-201ENST00000511793 424 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4BO75351 RNU6-1092P-201ENST00000516955 87 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 SUB1P1-201ENST00000524415 382 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 RAB11AP2-201ENST00000545905 639 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC053481.4-201ENST00000583164 216 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC004696.1-201ENST00000614345 607 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AL450472.3-201ENST00000615578 367 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4BO75351 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4BO75351 FRG1KP-201ENST00000623592 341 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4BO75351 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 AL137003.2-201ENST00000606924 2538 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 EXOC5P1-201ENST00000510543 1969 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.01□□□□□ -1.77
VPS4BO75351 AC073544.1-201ENST00000600110 1595 ntBASIC4.01□□□□□ -1.77
VPS4BO75351 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4□□□□□ -1.77
VPS4BO75351 AL158163.1-201ENST00000603915 1649 ntBASIC4□□□□□ -1.77
VPS4BO75351 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 RNU2-43P-201ENST00000410306 190 ntBASIC4□□□□□ -1.77
VPS4BO75351 RN7SKP177-201ENST00000410567 355 ntBASIC4□□□□□ -1.77
VPS4BO75351 UBE2FP1-201ENST00000416536 447 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC244098.2-201ENST00000422068 99 ntBASIC4□□□□□ -1.77
VPS4BO75351 FTH1P6-201ENST00000430768 320 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC087650.1-201ENST00000431445 468 ntBASIC4□□□□□ -1.77
VPS4BO75351 MTND3P23-201ENST00000431980 347 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4□□□□□ -1.77
VPS4BO75351 RNU7-182P-201ENST00000459009 62 ntBASIC4□□□□□ -1.77
VPS4BO75351 SNORD108-201ENST00000459332 71 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
VPS4BO75351 RPL31P61-201ENST00000496160 376 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC026427.2-201ENST00000506228 536 ntBASIC4□□□□□ -1.77
VPS4BO75351 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 AC026801.2-201ENST00000515352 425 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4□□□□□ -1.77
VPS4BO75351 AC103843.2-201ENST00000530523 682 ntBASIC4□□□□□ -1.77
VPS4BO75351 AP000889.1-201ENST00000530968 660 ntBASIC4□□□□□ -1.77
VPS4BO75351 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
VPS4BO75351 AC107016.1-201ENST00000550463 337 ntBASIC4□□□□□ -1.77
VPS4BO75351 AL121603.1-201ENST00000553815 142 ntBASIC4□□□□□ -1.77
VPS4BO75351 GNRHR2P1-201ENST00000555315 631 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
VPS4BO75351 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4□□□□□ -1.77
VPS4BO75351 AC130324.3-201ENST00000614165 542 ntBASIC4□□□□□ -1.77
VPS4BO75351 uc_338.11-201ENST00000619132 160 ntBASIC4□□□□□ -1.77
VPS4BO75351 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4□□□□□ -1.77
VPS4BO75351 AL445363.3-201ENST00000623080 671 ntBASIC4□□□□□ -1.77
VPS4BO75351 MIR4275-201ENST00000636486 87 ntBASIC4□□□□□ -1.77
VPS4BO75351 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 SPATA31D2P-201ENST00000429999 4388 ntBASIC4□□□□□ -1.77
VPS4BO75351 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4BO75351 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4□□□□□ -1.77
VPS4BO75351 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS4BO75351 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS4BO75351 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms