Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-178P-201ENST00000384631 104 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC243428.1-201ENST00000421099 264 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM13O60858 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM13O60858 EIF4A1P11-201ENST00000451239 222 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AL353752.1-201ENST00000454946 260 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 snoU13.20-201ENST00000459180 104 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 RPS23P3-201ENST00000470993 430 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM13O60858 AC020893.1-201ENST00000502452 580 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC114801.2-201ENST00000503825 781 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC009901.1-201ENST00000506703 541 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM13O60858 RNU7-51P-201ENST00000516560 62 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 SCARNA21.2-201ENST00000516600 166 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM13O60858 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM13O60858 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM13O60858 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM13O60858 BPIFA4P-203ENST00000603168 689 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM13O60858 MIR6768-201ENST00000610734 72 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 AC022467.1-201ENST00000614738 749 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM13O60858 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM13O60858 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 AC009902.3-201ENST00000606235 2172 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
TRIM13O60858 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 MAPK10-263ENST00000641052 4307 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AC139769.1-204ENST00000472297 1931 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 RNU6-179P-201ENST00000363350 107 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 RNU6-511P-201ENST00000363496 107 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 Y_RNA.234-201ENST00000364409 97 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 Y_RNA.478-201ENST00000384358 107 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 SNORA11.5-201ENST00000408163 128 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 RPL31P45-201ENST00000419532 356 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 RPL12P34-201ENST00000424532 479 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 USMG5P1-201ENST00000425964 177 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 HMGB3P21-201ENST00000452483 547 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AC016724.1-201ENST00000453215 421 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 PRELID3BP1-201ENST00000457142 540 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AC005532.2-201ENST00000467154 373 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM13O60858 Y_RNA.673-201ENST00000516306 88 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 RNA5SP360-201ENST00000516555 118 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 Y_RNA.715-201ENST00000517082 110 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 SNORA81.3-201ENST00000517283 198 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM13O60858 AP001880.2-201ENST00000538233 448 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AC092470.1-201ENST00000546187 132 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 SETP2-201ENST00000553886 926 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM13O60858 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
TRIM13O60858 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM13O60858 MIR4716-201ENST00000579628 84 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM13O60858 AC006254.3-201ENST00000603353 884 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AL031176.1-201ENST00000604554 466 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 SNX18P1Y-201ENST00000616231 511 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM13O60858 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 INTS6P1-201ENST00000504674 2530 ntBASIC4.45□□□□□ -1.7
TRIM13O60858 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM13O60858 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM13O60858 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRIM13O60858 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRIM13O60858 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM13O60858 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM13O60858 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM13O60858 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM13O60858 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 RNU1-15P-201ENST00000353977 144 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNA5SP123-201ENST00000363244 119 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 SNORD115-7-201ENST00000365306 82 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 SNORD113-1-201ENST00000365321 69 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 Y_RNA.376-201ENST00000365638 108 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNU6-187P-201ENST00000384139 106 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNU6-1093P-201ENST00000391194 107 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM13O60858 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM13O60858 AL590233.1-201ENST00000430017 456 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC011753.3-201ENST00000443436 406 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 GEMIN8P3-201ENST00000445417 720 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC108059.3-201ENST00000456388 214 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RPS3AP41-201ENST00000462701 778 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms