Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 BTBD10P1-201ENST00000549824 1352 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
GFRA3O60609 RNU6-288P-201ENST00000363690 104 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 COX6B1P7-201ENST00000430845 235 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA3O60609 RPS27AP3-201ENST00000453803 454 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 snoU13.1-201ENST00000459157 104 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA3O60609 RN7SKP49-201ENST00000516675 260 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 RN7SKP272-201ENST00000516988 232 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 AC008694.2-201ENST00000517591 306 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA3O60609 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA3O60609 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA3O60609 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA3O60609 AC067852.5-201ENST00000589299 310 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 MIR6780A-201ENST00000615089 68 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
GFRA3O60609 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.48□□□□□ -1.53
GFRA3O60609 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.48□□□□□ -1.53
GFRA3O60609 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
GFRA3O60609 SRP72P2-201ENST00000344851 1979 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA3O60609 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA3O60609 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
GFRA3O60609 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA3O60609 MIR494-201ENST00000349529 81 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 RNU6-1226P-201ENST00000384317 107 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GFRA3O60609 RNU2-15P-201ENST00000410692 191 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 CBX1P3-201ENST00000413296 527 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 OR2AM1P-201ENST00000422137 422 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 AL451062.2-201ENST00000427515 271 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 HSPE1P21-201ENST00000438283 308 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA3O60609 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA3O60609 SNRPGP16-201ENST00000533275 226 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 AC092470.1-201ENST00000546187 132 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA3O60609 AC115085.1-201ENST00000588924 229 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA3O60609 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.47□□□□□ -1.53
GFRA3O60609 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA3O60609 TNPO1P2-201ENST00000426249 2665 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 AC018809.2-201ENST00000602436 3823 ntBASIC5.47□□□□□ -1.53
GFRA3O60609 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA3O60609 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
GFRA3O60609 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
GFRA3O60609 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA3O60609 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.46□□□□□ -1.53
GFRA3O60609 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.46□□□□□ -1.53
GFRA3O60609 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA3O60609 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA3O60609 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA3O60609 SNORD58C-201ENST00000365223 64 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 RNU6-728P-201ENST00000365375 104 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 SNORD82-201ENST00000365530 70 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 RNU6-756P-201ENST00000383997 107 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 SNORA57.1-201ENST00000391227 145 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 RNU1-139P-201ENST00000391307 165 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 SNORD56-201ENST00000413522 71 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AP000907.1-201ENST00000428428 510 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC073261.1-201ENST00000429409 121 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 CEACAMP1-201ENST00000434624 1035 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AL590399.4-201ENST00000436561 601 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC006028.1-201ENST00000438379 402 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA3O60609 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA3O60609 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA3O60609 AC005042.3-201ENST00000453230 174 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 RPL23AP2-201ENST00000471227 466 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 RN7SKP122-201ENST00000515923 296 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 SCARNA8-201ENST00000515924 131 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA3O60609 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA3O60609 AL358913.1-201ENST00000554342 121 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 MIR3189-201ENST00000578735 73 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA3O60609 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA3O60609 RMST_4.1-201ENST00000616886 107 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 AC109583.2-201ENST00000617367 129 ntBASIC5.46□□□□□ -1.54
GFRA3O60609 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms