Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU4-35P-201ENST00000362588 141 ntBASIC3.05□□□□□ -1.92
SNX3O60493 RNY3P13-201ENST00000365542 102 ntBASIC3.05□□□□□ -1.92
SNX3O60493 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SNX3O60493 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX3O60493 SNORD116-9-201ENST00000384000 95 ntBASIC3.05□□□□□ -1.92
SNX3O60493 SNORD116-3-201ENST00000384287 95 ntBASIC3.05□□□□□ -1.92
SNX3O60493 SNORD116-7-201ENST00000384404 95 ntBASIC3.05□□□□□ -1.92
SNX3O60493 SNORD116-5-201ENST00000384462 95 ntBASIC3.05□□□□□ -1.92
SNX3O60493 RNU6-1197P-201ENST00000391183 107 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
SNX3O60493 RN7SKP140-201ENST00000411196 284 ntBASIC3.05□□□□□ -1.92
SNX3O60493 RN7SKP142-201ENST00000411236 328 ntBASIC3.05□□□□□ -1.92
SNX3O60493 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX3O60493 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX3O60493 RNA5SP269-201ENST00000459032 137 ntBASIC3.05□□□□□ -1.92
SNX3O60493 RPS20P20-201ENST00000460498 340 ntBASIC3.05□□□□□ -1.92
SNX3O60493 ACTR3P3-201ENST00000480448 893 ntBASIC3.05□□□□□ -1.92
SNX3O60493 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX3O60493 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX3O60493 HMGN1P11-201ENST00000508668 303 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX3O60493 CDC42P4-201ENST00000510507 563 ntBASIC3.05□□□□□ -1.92
SNX3O60493 TTC39CP1-201ENST00000512513 755 ntBASIC3.05□□□□□ -1.92
SNX3O60493 MTND5P13-201ENST00000513046 1079 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX3O60493 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SNX3O60493 RNU6-390P-201ENST00000516259 103 ntBASIC3.05□□□□□ -1.92
SNX3O60493 Y_RNA.695-201ENST00000516715 107 ntBASIC3.05□□□□□ -1.92
SNX3O60493 NRON-201ENST00000517270 370 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX3O60493 CASP1P1-201ENST00000526345 212 ntBASIC3.05□□□□□ -1.92
SNX3O60493 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.05□□□□□ -1.92
SNX3O60493 RPL21P5-201ENST00000554662 472 ntBASIC3.05□□□□□ -1.92
SNX3O60493 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX3O60493 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
SNX3O60493 BNIP3P8-201ENST00000597863 560 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC013553.2-201ENST00000604244 589 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC008962.1-201ENST00000605729 304 ntBASIC3.05□□□□□ -1.92
SNX3O60493 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX3O60493 RNU6-87P-201ENST00000607561 108 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC103710.1-201ENST00000610003 901 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
SNX3O60493 AC013476.2-201ENST00000614456 459 ntBASIC3.05□□□□□ -1.92
SNX3O60493 SDR42E1P2-201ENST00000614861 481 ntBASIC3.05□□□□□ -1.92
SNX3O60493 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX3O60493 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX3O60493 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX3O60493 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX3O60493 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX3O60493 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SNX3O60493 AC091390.3-201ENST00000426478 338 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AL356867.1-201ENST00000429623 299 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX3O60493 AC092573.2-201ENST00000434546 243 ntBASIC3.04□□□□□ -1.92
SNX3O60493 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX3O60493 PGBD4P3-201ENST00000440731 581 ntBASIC3.04□□□□□ -1.92
SNX3O60493 MTATP6P30-201ENST00000443540 664 ntBASIC3.04□□□□□ -1.92
SNX3O60493 RPL39P40-201ENST00000445481 146 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC012181.1-201ENST00000479895 423 ntBASIC3.04□□□□□ -1.92
SNX3O60493 RPL9P33-201ENST00000484311 566 ntBASIC3.04□□□□□ -1.92
SNX3O60493 PAICSP4-201ENST00000517543 1253 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AP003467.2-201ENST00000520175 319 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX3O60493 HIGD1AP5-201ENST00000529959 259 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC007115.1-201ENST00000546853 234 ntBASIC3.04□□□□□ -1.92
SNX3O60493 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX3O60493 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX3O60493 MIR4286-201ENST00000580651 93 ntBASIC3.04□□□□□ -1.92
SNX3O60493 PIGPP4-201ENST00000584447 307 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX3O60493 AC093227.2-201ENST00000589357 285 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC097065.2-201ENST00000608159 533 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC004908.3-201ENST00000610248 625 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AL136295.6-201ENST00000610486 658 ntBASIC3.04□□□□□ -1.92
SNX3O60493 uc_338.12-201ENST00000616344 181 ntBASIC3.04□□□□□ -1.92
SNX3O60493 ZYXP1-201ENST00000617638 118 ntBASIC3.04□□□□□ -1.92
SNX3O60493 PLCE1P1-201ENST00000622094 305 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AC026422.1-201ENST00000623961 452 ntBASIC3.04□□□□□ -1.92
SNX3O60493 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX3O60493 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX3O60493 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX3O60493 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX3O60493 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX3O60493 Y_RNA.77-201ENST00000362962 107 ntBASIC3.03□□□□□ -1.92
SNX3O60493 RNU4-91P-201ENST00000364778 135 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AL359634.1-202ENST00000404721 284 ntBASIC3.03□□□□□ -1.92
SNX3O60493 HMGN1P14-201ENST00000412459 517 ntBASIC3.03□□□□□ -1.92
SNX3O60493 ELOCP17-201ENST00000414751 326 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SPA17P1-201ENST00000416656 452 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX3O60493 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SAR1AP4-201ENST00000429225 591 ntBASIC3.03□□□□□ -1.92
SNX3O60493 USP12PX-201ENST00000432383 1057 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX3O60493 NEK4P1-201ENST00000433383 879 ntBASIC3.03□□□□□ -1.92
SNX3O60493 TAAR7P-201ENST00000436141 242 ntBASIC3.03□□□□□ -1.92
SNX3O60493 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AL022238.1-201ENST00000442557 355 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC140076.1-201ENST00000449897 361 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms