Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HOXA2O43364 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXA2O43364 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXA2O43364 AC004817.4-201ENST00000602396 3625 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXA2O43364 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HOXA2O43364 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HOXA2O43364 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 AL592437.2-201ENST00000421655 2434 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC068769.1-201ENST00000474767 2426 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 RNU6-384P-201ENST00000364900 104 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 Y_RNA.304-201ENST00000365011 112 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 GNG5P2-201ENST00000372054 207 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXA2O43364 RPL23AP45-201ENST00000476406 468 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC022133.1-201ENST00000490961 571 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXA2O43364 RNU6-1012P-201ENST00000516606 109 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC109479.2-201ENST00000517842 174 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC092490.3-201ENST00000545370 572 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXA2O43364 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXA2O43364 AC023824.2-201ENST00000566185 400 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXA2O43364 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC011447.4-201ENST00000587562 111 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 AC037487.3-201ENST00000606668 112 ntBASIC5.84□□□□□ -1.47
HOXA2O43364 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXA2O43364 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXA2O43364 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.84□□□□□ -1.48
HOXA2O43364 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.84□□□□□ -1.48
HOXA2O43364 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
HOXA2O43364 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXA2O43364 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HOXA2O43364 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HOXA2O43364 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXA2O43364 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXA2O43364 HSPA8P15-201ENST00000401676 786 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 RPL19P1-201ENST00000411635 428 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 AC093162.1-201ENST00000419682 124 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 AL158156.1-201ENST00000422509 473 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXA2O43364 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXA2O43364 AL590399.6-201ENST00000446396 307 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 AC091021.1-201ENST00000468051 388 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXA2O43364 RNU7-200P-201ENST00000516105 62 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 AC025755.1-201ENST00000521306 278 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXA2O43364 MIR4659A-201ENST00000580269 81 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 Mico1.1-201ENST00000611698 204 ntBASIC5.83□□□□□ -1.48
HOXA2O43364 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXA2O43364 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXA2O43364 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXA2O43364 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA2O43364 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA2O43364 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA2O43364 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA2O43364 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 AC011504.1-201ENST00000623331 4103 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXA2O43364 RNA5SP443-201ENST00000363083 132 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 RNU6-740P-201ENST00000364734 105 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 RNY4P28-201ENST00000365281 93 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 MIR585-201ENST00000384887 94 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXA2O43364 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC119751.6-201ENST00000416712 186 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AL138785.1-201ENST00000425821 331 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 MTATP6P4-201ENST00000427725 675 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 RPL21P40-201ENST00000428586 483 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXA2O43364 KRT8P51-201ENST00000438938 274 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 HSPE1P25-201ENST00000455484 251 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms