Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.07□□□□□ -1.6
SOX1O00570 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SOX1O00570 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 Y_RNA.480-201ENST00000384364 102 ntBASIC5.07□□□□□ -1.6
SOX1O00570 RNU6-45P-201ENST00000384471 107 ntBASIC5.07□□□□□ -1.6
SOX1O00570 MIR1302-6-201ENST00000408466 90 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC099677.1-201ENST00000420575 175 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 RPL21P2-201ENST00000440049 481 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX1O00570 RN7SL98P-201ENST00000462271 300 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX1O00570 AC093815.1-201ENST00000508637 280 ntBASIC5.07□□□□□ -1.6
SOX1O00570 SNORA40.14-201ENST00000516543 86 ntBASIC5.07□□□□□ -1.6
SOX1O00570 Y_RNA.715-201ENST00000517082 110 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC007375.1-201ENST00000554513 578 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX1O00570 AC078899.3-201ENST00000599065 212 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC012119.1-201ENST00000603184 222 ntBASIC5.07□□□□□ -1.6
SOX1O00570 IGHV3-29-201ENST00000604817 344 ntBASIC5.07□□□□□ -1.6
SOX1O00570 MIR6867-201ENST00000610636 67 ntBASIC5.07□□□□□ -1.6
SOX1O00570 AC096577.2-201ENST00000611455 153 ntBASIC5.07□□□□□ -1.6
SOX1O00570 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.07□□□□□ -1.6
SOX1O00570 SOCS5P3-201ENST00000425115 1576 ntBASIC5.07□□□□□ -1.6
SOX1O00570 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX1O00570 ABCC13-202ENST00000463099 3842 ntBASIC5.07□□□□□ -1.6
SOX1O00570 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SOX1O00570 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX1O00570 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SOX1O00570 AC010615.1-201ENST00000594254 1764 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SOX1O00570 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.06□□□□□ -1.6
SOX1O00570 AC233263.6-201ENST00000631132 1963 ntBASIC5.06□□□□□ -1.6
SOX1O00570 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SOX1O00570 Y_RNA.461-201ENST00000384263 103 ntBASIC5.06□□□□□ -1.6
SOX1O00570 MIR7-3-201ENST00000384898 110 ntBASIC5.06□□□□□ -1.6
SOX1O00570 MIR517A-201ENST00000385001 87 ntBASIC5.06□□□□□ -1.6
SOX1O00570 NDUFB4P4-201ENST00000404822 243 ntBASIC5.06□□□□□ -1.6
SOX1O00570 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 FTLP19-201ENST00000433300 394 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AL133547.1-201ENST00000448546 220 ntBASIC5.06□□□□□ -1.6
SOX1O00570 SNORD127-201ENST00000458892 86 ntBASIC5.06□□□□□ -1.6
SOX1O00570 RNU7-138P-201ENST00000459479 64 ntBASIC5.06□□□□□ -1.6
SOX1O00570 RPL37P6-201ENST00000460682 294 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AC108860.1-201ENST00000484521 383 ntBASIC5.06□□□□□ -1.6
SOX1O00570 VN1R105P-201ENST00000486595 910 ntBASIC5.06□□□□□ -1.6
SOX1O00570 RPL17P19-201ENST00000489069 552 ntBASIC5.06□□□□□ -1.6
SOX1O00570 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 RN7SKP60-201ENST00000516985 239 ntBASIC5.06□□□□□ -1.6
SOX1O00570 SNORA70.24-201ENST00000517233 118 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.06□□□□□ -1.6
SOX1O00570 HMGB3P26-201ENST00000560051 582 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.06□□□□□ -1.6
SOX1O00570 AL512605.2-201ENST00000592972 256 ntBASIC5.06□□□□□ -1.6
SOX1O00570 MTND4LP5-201ENST00000605152 292 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AC140479.6-201ENST00000633535 357 ntBASIC5.06□□□□□ -1.6
SOX1O00570 AL031595.2-201ENST00000624215 19071 ntBASIC5.06□□□□□ -1.6
SOX1O00570 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX1O00570 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX1O00570 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SOX1O00570 PHKBP1-201ENST00000450951 1951 ntBASIC5.05□□□□□ -1.6
SOX1O00570 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SOX1O00570 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
SOX1O00570 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.05□□□□□ -1.6
SOX1O00570 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 MIR383-201ENST00000362257 73 ntBASIC5.05□□□□□ -1.6
SOX1O00570 RNU6-989P-201ENST00000362756 107 ntBASIC5.05□□□□□ -1.6
SOX1O00570 RNU1-132P-201ENST00000364300 164 ntBASIC5.05□□□□□ -1.6
SOX1O00570 Y_RNA.276-201ENST00000364732 109 ntBASIC5.05□□□□□ -1.6
SOX1O00570 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms