Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1AO00555 OR4K8P-201ENST00000578842 1048 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 MTCO1P14-201ENST00000441695 1559 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 AC090740.1-201ENST00000623193 2262 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
CACNA1AO00555 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CACNA1AO00555 Y_RNA.288-201ENST00000364854 92 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
CACNA1AO00555 AP000926.1-201ENST00000479573 241 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 AC103833.1-201ENST00000517442 172 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.29□□□□□ -2.2
CACNA1AO00555 AC073544.1-201ENST00000600110 1595 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CACNA1AO00555 RNA5SP205-201ENST00000364653 136 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 RPL7P53-201ENST00000421245 739 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.29□□□□□ -2.2
CACNA1AO00555 snoU13.11-201ENST00000459219 104 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 AC026801.1-201ENST00000497178 464 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.29□□□□□ -2.2
CACNA1AO00555 HSPE1P3-201ENST00000559254 309 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 MIR4653-201ENST00000585107 83 ntBASIC1.29□□□□□ -2.2
CACNA1AO00555 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CACNA1AO00555 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CACNA1AO00555 MTCO1P6-201ENST00000481192 1384 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 RNA5SP138-201ENST00000365098 114 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AC013470.3-201ENST00000420252 1194 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 RPL26P9-201ENST00000457466 433 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 PDCD5P1-201ENST00000543528 309 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AC009127.3-201ENST00000570531 403 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1AO00555 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1AO00555 AC006270.3-201ENST00000605967 1036 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AC016590.3-201ENST00000611171 753 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AC006001.4-201ENST00000622243 395 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1AO00555 AP000776.1-201ENST00000530032 1663 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 RNA5SP239-201ENST00000410218 129 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 RNA5SP118-201ENST00000410385 109 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1AO00555 AC107015.1-201ENST00000466902 747 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 SNORA31.15-201ENST00000516771 132 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AC004486.1-201ENST00000546846 233 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AL078605.1-201ENST00000603529 500 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 AL627309.6-201ENST00000606857 840 ntBASIC1.28□□□□□ -2.2
CACNA1AO00555 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1AO00555 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CACNA1AO00555 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CACNA1AO00555 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.27□□□□□ -2.21
CACNA1AO00555 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.27□□□□□ -2.21
CACNA1AO00555 OR6C7P-201ENST00000547875 934 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 AP002967.1-201ENST00000624203 539 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CACNA1AO00555 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CACNA1AO00555 Y_RNA.413-201ENST00000384007 102 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 Y_RNA.453-201ENST00000384223 109 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 NDUFS5P3-201ENST00000450668 321 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 snoU109.1-201ENST00000459339 135 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 Y_RNA.754-201ENST00000476024 102 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.27□□□□□ -2.21
CACNA1AO00555 Y_RNA.790-201ENST00000614282 102 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 Y_RNA.782-201ENST00000614695 102 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 AL158801.5-201ENST00000623123 465 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 MIR6715B-201ENST00000637172 77 ntBASIC1.27□□□□□ -2.21
CACNA1AO00555 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
CACNA1AO00555 DHFRP5-201ENST00000406944 564 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 MTCO1P3-201ENST00000429327 192 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 ATG10-AS1-201ENST00000504846 648 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 NDUFB4P9-201ENST00000511646 388 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 AP003117.1-201ENST00000602771 554 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 RNU6-112P-201ENST00000363599 104 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 SNORD114-3-201ENST00000364969 75 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CACNA1AO00555 AL096701.2-201ENST00000416920 238 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CACNA1AO00555 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.26□□□□□ -2.21
CACNA1AO00555 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CACNA1AO00555 AC108676.2-201ENST00000605225 163 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.26□□□□□ -2.21
CACNA1AO00555 AC073348.1-201ENST00000623002 331 ntBASIC1.26□□□□□ -2.21
CACNA1AO00555 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CACNA1AO00555 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.26□□□□□ -2.21
CACNA1AO00555 DEFB108F-201ENST00000344638 222 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 RNU6-222P-201ENST00000362438 107 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 RNU6-16P-201ENST00000384385 107 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 MIR320A-201ENST00000385302 82 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AL356776.1-201ENST00000406574 447 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.25□□□□□ -2.21
CACNA1AO00555 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.25□□□□□ -2.21
CACNA1AO00555 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.25□□□□□ -2.21
CACNA1AO00555 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.25□□□□□ -2.21
CACNA1AO00555 CBX3P2-202ENST00000583365 535 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AC211469.2-201ENST00000605461 205 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AC067863.3-201ENST00000624172 122 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
CACNA1AO00555 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
CACNA1AO00555 CYCSP33-201ENST00000414485 327 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms