Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.61□□□□□ -1.67
RFXAPO00287 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFXAPO00287 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 CASC19-284ENST00000642142 1868 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 RNA5SP119-201ENST00000362715 117 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 Y_RNA.60-201ENST00000362831 98 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 MIR649-201ENST00000384843 97 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 MIR19A-201ENST00000384878 82 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 RNU11-4P-201ENST00000391149 133 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 SNORA75.6-201ENST00000391318 127 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC097374.1-203ENST00000400783 485 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC108032.1-201ENST00000416706 207 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 EIF4EP1-201ENST00000422311 642 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AL590632.1-201ENST00000424289 371 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AL590233.1-201ENST00000430017 456 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 RPL23AP74-201ENST00000437246 471 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 RPL23AP89-201ENST00000439324 255 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.61□□□□□ -1.67
RFXAPO00287 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.61□□□□□ -1.67
RFXAPO00287 RPS3AP12-201ENST00000443616 753 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 HMGN3P1-201ENST00000453847 193 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AP000893.1-201ENST00000474462 794 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.61□□□□□ -1.67
RFXAPO00287 HIGD1AP13-201ENST00000509878 289 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC099522.1-202ENST00000514718 367 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 RNU6-1016P-201ENST00000516689 94 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC024224.1-201ENST00000538284 609 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.61□□□□□ -1.67
RFXAPO00287 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 AL160281.1-201ENST00000605307 311 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AL008729.2-201ENST00000606393 473 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 SNORA51-201ENST00000606420 132 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 AL138726.1-201ENST00000614873 333 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 MIR6128-201ENST00000615528 109 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 AC241377.1-201ENST00000619797 406 ntBASIC4.61□□□□□ -1.67
RFXAPO00287 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFXAPO00287 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFXAPO00287 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RFXAPO00287 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
RFXAPO00287 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 AC133552.1-201ENST00000569988 4007 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RFXAPO00287 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.6□□□□□ -1.67
RFXAPO00287 RNU5A-8P-201ENST00000364102 114 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 Y_RNA.552-201ENST00000384665 112 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 MIR491-201ENST00000384877 84 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFXAPO00287 MTCO2P33-201ENST00000402100 465 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.6□□□□□ -1.67
RFXAPO00287 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 OR2AS1P-201ENST00000427827 319 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.6□□□□□ -1.67
RFXAPO00287 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.6□□□□□ -1.67
RFXAPO00287 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.6□□□□□ -1.67
RFXAPO00287 AC093156.1-201ENST00000440382 670 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 BTF3P6-201ENST00000448054 499 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC002553.2-201ENST00000453217 340 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC005229.2-201ENST00000456995 399 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.6□□□□□ -1.67
RFXAPO00287 RPL35AP15-201ENST00000468042 339 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.6□□□□□ -1.67
RFXAPO00287 AC079140.5-201ENST00000507882 310 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 RNU6-408P-201ENST00000515910 100 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 RNA5SP497-201ENST00000516081 97 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 SNORA74D-201ENST00000516404 141 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.6□□□□□ -1.67
RFXAPO00287 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.6□□□□□ -1.67
RFXAPO00287 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.6□□□□□ -1.67
RFXAPO00287 AC135001.1-201ENST00000544546 283 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 OR11H5P-201ENST00000554039 926 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 AC024619.4-201ENST00000580924 316 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFXAPO00287 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RFXAPO00287 AC107081.3-201ENST00000612715 2034 ntBASIC4.6□□□□□ -1.67
RFXAPO00287 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.6□□□□□ -1.67
RFXAPO00287 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFXAPO00287 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFXAPO00287 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.59□□□□□ -1.67
RFXAPO00287 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFXAPO00287 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFXAPO00287 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RFXAPO00287 RNU6-874P-201ENST00000362390 105 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms