Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AC100793.4-201ENST00000613683 429 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 Z99129.2-201ENST00000619967 314 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AL034408.1-202ENST00000636088 415 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC012442.3-202ENST00000636742 206 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC010149.2-201ENST00000637608 315 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 PABPC1P9-201ENST00000426076 1612 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC188H7C350 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC188H7C350 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC188H7C350 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC188H7C350 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC188H7C350 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC188H7C350 RNU6-500P-201ENST00000362349 107 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 Y_RNA.97-201ENST00000363094 102 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 RNU6-525P-201ENST00000363685 104 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 ELOCP17-201ENST00000414751 326 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 HSPE1P1-201ENST00000421494 318 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AL512649.1-201ENST00000428997 581 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC188H7C350 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 USP12PX-201ENST00000432383 1057 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC005019.1-201ENST00000436455 431 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC188H7C350 MTND1P30-201ENST00000441241 901 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 RNU6-420P-201ENST00000458780 107 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 RPL7P49-201ENST00000471402 708 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 RPL30P6-201ENST00000475925 342 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC188H7C350 RNU6-928P-201ENST00000516876 104 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC025881.1-201ENST00000518851 512 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC188H7C350 AC093012.1-202ENST00000549403 582 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 AC034105.3-201ENST00000565294 442 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 ACTR3BP3-201ENST00000565577 979 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 HMGB1P6-201ENST00000569046 646 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC188H7C350 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC188H7C350 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC188H7C350 CKS1BP3-201ENST00000600888 237 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC121334.2-201ENST00000605387 271 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC069234.5-201ENST00000611056 416 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC122133.1-201ENST00000613964 233 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AL138880.2-201ENST00000616214 239 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC012150.2-201ENST00000621300 544 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AC079248.2-201ENST00000623779 326 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 AL136313.1-201ENST00000624804 202 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
CCDC188H7C350 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC188H7C350 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC188H7C350 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC188H7C350 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC188H7C350 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC188H7C350 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 SNORA63.1-201ENST00000362493 131 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 Y_RNA.333-201ENST00000365274 102 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 RNU6-533P-201ENST00000384144 107 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 RNU6-920P-201ENST00000410926 92 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL451074.5-201ENST00000415894 435 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC188H7C350 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC118469.1-201ENST00000442943 488 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 GDI2P2-201ENST00000445131 608 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AC092798.1-201ENST00000458542 409 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 snoU13.28-201ENST00000459235 104 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC010631.1-201ENST00000474150 156 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 KC877373.1-201ENST00000479066 408 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC188H7C350 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC188H7C350 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC188H7C350 MTND3P12-201ENST00000559068 328 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL356432.3-201ENST00000568952 465 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms