Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 SGO1P2-201ENST00000429458 1589 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 U8.2-201ENST00000363156 134 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 RNU4-91P-201ENST00000364778 135 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 SNORA51.12-201ENST00000384448 134 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 RNU6-939P-201ENST00000384634 107 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 U3.29-201ENST00000391296 212 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 RNU4-26P-201ENST00000410270 107 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC244636.1-201ENST00000421152 228 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC092047.1-201ENST00000424997 240 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AL645638.1-201ENST00000440519 361 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC107626.1-201ENST00000471084 183 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 MRPS36P2-201ENST00000512569 299 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 RNA5SP445-201ENST00000515889 115 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 IGKV2-36-201ENST00000519999 223 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 GNAI2P1-201ENST00000541815 315 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC108479.2-201ENST00000617314 601 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AL445493.3-201ENST00000619568 477 ntBASIC0.82□□□□□ -2.28
LINC01549A6NIU2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LINC01549A6NIU2 AC007785.2-201ENST00000598627 1916 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 SNORD26-201ENST00000384147 75 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AL589655.1-201ENST00000405398 482 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 HNRNPDP2-201ENST00000406475 478 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 NUP35P2-201ENST00000416748 943 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 TMEM167AP1-201ENST00000423409 219 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 Z93242.1-201ENST00000427102 353 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 RPS15AP27-201ENST00000449183 343 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AC087588.1-201ENST00000462203 316 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 RNU6-295P-201ENST00000516901 104 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AP003033.1-201ENST00000527244 415 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 MTND2P26-201ENST00000528255 1029 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AL161670.1-201ENST00000554348 137 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AC025918.2-201ENST00000558683 763 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 AC023043.2-201ENST00000589678 1026 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 BNIP3P33-201ENST00000598912 569 ntBASIC0.81□□□□□ -2.28
LINC01549A6NIU2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LINC01549A6NIU2 CBX3P1-201ENST00000325243 554 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 Y_RNA.333-201ENST00000365274 102 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AC092634.2-201ENST00000428146 1010 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01549A6NIU2 DNAJC19P4-201ENST00000440115 345 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AC117503.1-201ENST00000472241 394 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 OR2A41P-201ENST00000473586 105 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 RRN3P3-201ENST00000549207 578 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AC011494.1-201ENST00000596454 237 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AL078605.1-201ENST00000603529 500 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AC097655.1-201ENST00000635075 318 ntBASIC0.8□□□□□ -2.28
LINC01549A6NIU2 AP000776.1-201ENST00000530032 1663 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RNU6-1331P-201ENST00000363658 106 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RNU1-148P-201ENST00000384472 162 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 MIR513A1-201ENST00000385138 129 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RNU6-220P-201ENST00000390919 107 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 MIR1250-201ENST00000408098 113 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RNU6-174P-201ENST00000410406 106 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 OR6C66P-201ENST00000414917 930 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC098614.2-201ENST00000426040 255 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RPS29P29-201ENST00000456396 171 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 DYNLL1P5-201ENST00000467158 270 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC112518.2-201ENST00000508565 425 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 RNU1-92P-201ENST00000517017 135 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AP001804.3-201ENST00000525146 880 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms