Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 EOGT-210ENST00000615922 1931 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 RNA5SP515-201ENST00000364570 118 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 SNORA63.7-201ENST00000365579 123 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 Y_RNA.380-201ENST00000365663 111 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 RNU6-26P-201ENST00000383985 107 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 Y_RNA.424-201ENST00000384063 103 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 RNU6-784P-201ENST00000384330 106 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC011933.1-201ENST00000413334 321 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 RPL9P32-201ENST00000464118 620 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC018437.1-201ENST00000492214 406 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC093815.1-201ENST00000508637 280 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 RNU4-77P-201ENST00000516692 156 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC007991.1-201ENST00000522680 631 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC104576.1-201ENST00000524225 88 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC107918.3-201ENST00000533272 382 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC005868.1-201ENST00000536421 331 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 SUB1P3-201ENST00000564581 315 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 MIR3138-201ENST00000585238 82 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AL355297.3-201ENST00000604082 446 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 HMGN2P28-201ENST00000606102 262 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 SNORD91B-202ENST00000608459 222 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC005344.1-201ENST00000613391 459 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AL031601.2-202ENST00000622650 282 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 AC005183.1-201ENST00000603687 1979 ntBASIC5.67□□□□□ -1.5
USP17L3A6NCW0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
USP17L3A6NCW0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC025031.4-201ENST00000621248 3271 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC091812.1-201ENST00000432235 1948 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL731566.1-201ENST00000620490 1937 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 Y_RNA.151-201ENST00000363566 112 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 RNU6-450P-201ENST00000364654 107 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 RNU6-823P-201ENST00000391042 103 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL590762.2-201ENST00000395798 571 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 RPS15AP6-201ENST00000420703 385 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL356387.2-201ENST00000422272 243 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 EIF4EP1-201ENST00000422311 642 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 RPL7AP25-201ENST00000423357 805 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 HMGB1P9-201ENST00000429856 646 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 USP9YP16-201ENST00000430287 407 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 USP9YP23-201ENST00000455085 407 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 PCMTD1P1-201ENST00000455560 355 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC112492.4-201ENST00000456549 352 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC087369.1-201ENST00000520775 996 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 SNRPGP16-201ENST00000533275 226 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 HSBP1P1-201ENST00000555205 166 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC006349.1-201ENST00000555526 235 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AC005951.2-201ENST00000576282 495 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 AL138825.1-201ENST00000618587 192 ntBASIC5.66□□□□□ -1.5
USP17L3A6NCW0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
USP17L3A6NCW0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
USP17L3A6NCW0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 AC021146.4-201ENST00000309229 279 ntBASIC5.65□□□□□ -1.5
USP17L3A6NCW0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 RNU6-1109P-201ENST00000391187 107 ntBASIC5.65□□□□□ -1.5
USP17L3A6NCW0 Z98745.1-201ENST00000402553 494 ntBASIC5.65□□□□□ -1.5
USP17L3A6NCW0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.65□□□□□ -1.5
USP17L3A6NCW0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms